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Information for unigene UN50027

FASTA Sequence
Unigene ID: UN50027Length: 919 SSR 
GGATTTACACCCTCACGCCATGTGTGGAGGAGCTATAATCTCCGATTTCATCCCGCCGCCACTGCCGCCGATTCAGCTTTTGGCAA
GAAAGTTGCTGACGGAGAAGGTGAGAGATCTGCAAAGAGGAAGAGGAAGAGCCAGTACCGAGGTATAAGACAACGTCCTTGGGGAA
AATGGGCTGCTGAGATTCGTGATCCAAGGGAAGGTTCAAGAGTGTGGCTTGGAACTTTCAAAACTGCCGAGGAAGCTGCAAGAGCT
TACGATGCTGCAGCTCGTAGAATCCGTGGTTCCAAAGCTAAGGTGAATTTCCCAGAGGAGAACCCACTTGCCAACAAGGTGGCTAA
ACCTAACCCAAACCCAACTCTGGTTCAGAACGTGGACAACTCCTTTGACAATATATGTTTCATGGAGGAGAAACAAGAGGTTAACA
GCAGCAACAACAACAACAATCAATTTGGTAATGGGTATCATCAGTTATTCAGCTCAGACCAGGGTAGTAACTCATTCGGTTGTTCT
GAGTTTGGTTGGAACGATCAAGCTCCTATAACTCCTGAGATCTCTTCTGCGTTTATCAACAACAACAACTCTGCTCTATTCGTTGA
GGAAGCTGATCCAGCTAAGAAATTTAAGGCCATGGATTTCGAGACACCTTACAACAACACTGAATGGGATTCTTCACTTGATTTCT
TCAACGAAGACGCCGCCGACTCAGGACAATGGTACAAACCCTATGGAACTATGGAGCATTGATGAGATCGATTCCATGATTGGAGG
AGTCTTCTGAAGAGATCCGTTGTCATTTAAAACATTTTGAACTCTTTCTGGTGGTCTTTTGTATTCGCTTGTGTTTTGGTTCTTTC
ACTTTGCGCACCCAAGCGTCTCCCTTAAACATTGTCATAACTCATAAGTTAATATGTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891780 hypothetical protein ARALYDRAFT_892441 [Arabidopsis lyrata subsp. lyrata]4823e-046
NP_175794 ethylene-responsive transcription factor RAP2-12 [Arabidopsis thaliana]4715e-045
AAM65746 AP2 domain containing protein, putative [Arabidopsis thaliana]4715e-045
AAC49778 AP2 domain containing protein RAP2.12 [Arabidopsis thaliana]4715e-045
NP_001077718 ethylene-responsive transcription factor RAP2-12 [Arabidopsis thaliana]4715e-045

Swiss-Prot top hits (Blast detail)Scoree value
Q9SSA8 Ethylene-responsive transcription factor RAP2-124712e-046
Q9LUM4 Ethylene-responsive transcription factor RAP2-23646e-034
Q6K7E6 Ethylene-responsive transcription factor 13332e-030
O22259 Ethylene-responsive transcription factor ERF0713002e-026
P42736 Ethylene-responsive transcription factor RAP2-32931e-025

TrEMBL top hits (Blast detail)Scoree value
A8MRC0 Uncharacterized protein At1g53910.34714e-045
B9DG10 AT1G53910 protein4714e-045
B9N7H5 AP2/ERF domain-containing transcription factor4543e-043
D6MKN8 Transcription factor (Fragment)4517e-043
D5L139 AP2 domain class transcription factor3773e-034

Arabidopsis top hits (Blast detail)Scoree value
AT1G53910.1 RAP2.12; DNA binding / transcription factor4712e-047
AT1G53910.2 RAP2.12; DNA binding / transcription factor4712e-047
AT1G53910.3 RAP2.12; DNA binding / transcription factor4712e-047
AT3G14230.3 RAP2.2; DNA binding / transcription factor3663e-035
AT3G14230.1 RAP2.2; DNA binding / transcription factor3645e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information