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Information for unigene UN50100

FASTA Sequence
Unigene ID: UN50100Length: 978 SSR 
GAGTCACGGCTCATCTTTCTCTGCTGATTTGCATCTTCATCTTTGTTCTCTATCTCTGTACTTGAGGAGGGTTTCGAAGTGTTGAG
TAACCCTTTGAACCAACTGCCTTGCAATCTCACGTTGCCATTTTCTGAATTGGTGAGGGTCCCTCCAGGTCGTTGCTGAGAGCCAT
TGGAGCCGTTGGTTACGTTTGATGTAACATTGGAAAGGAAGCGATATGCCACTTTACTAGCTGATACTAGTTCAGTTTTGGCTTGC
TTTATCCTCATCGCTGTGTTTCCTGCAACTTCCAAGGCCGTGTCACCAGCATGGGCAAAGCGATTCACCCAACCTGGGAGCTTTGG
GACGCCAAGTACATCACAGAGTACATCACAGAAATGATTGCAGTTTTTAGACAAGAGATCATACGAATGTCCAGGCCACTCCCTGC
TGAGCTCACGCAGGATCTGATCGACCATGAAAATGGTGCAATCAGTCCTCCCAAGGACGATTTTCTCACGATAAGTATACATAGGG
TTCTTGCTGCTAGGACAGCTGAAGACGCCAGTTCCTTGTTCACAAAACCCATAAGACCACTCATCATCTCCATATACCTGAATGGC
GCTGTGGAAGATGCCGCCAAGGCCAATACCGTCTTTGAAGAACCTGTTGATCTGGAGAATGGTGTTGTTAGTCTTCTCCGATCCAC
TGTTTGTCACATCGTATATGTGTAGCACTACCTCCCCCATGATTCCCCTCACTACCAGATAAAGCTCGAACCCTAATTTCTAAGCA
ACTGAAGAGTTTGTAGATTCTATCTGTAGCTGGAAACCCTAAATAAATAAGACTCGAACCAAATCCACTTCCCCTTCAACAATTCC
ACTACTAGATCTCTAAAAGTAAATGAGGTTTTGTTTTGTCTTCTCTCCTCACGGTTTCTCGATTTCAGAACGGCGGTGGTGGTGGT
GGTGGTCGGGTCTTGAGAAATGACTGTTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194298 PPPDE putative thiol peptidase family protein [Arabidopsis thaliana]11266e-121
NP_194296 PPPDE putative thiol peptidase family protein [Arabidopsis thaliana]11203e-120
XP_002869660 hypothetical protein ARALYDRAFT_492258 [Arabidopsis lyrata subsp. lyrata]11169e-120
XP_002869661 hypothetical protein ARALYDRAFT_914007 [Arabidopsis lyrata subsp. lyrata]11024e-118
CBI22663 unnamed protein product [Vitis vinifera]8515e-089

Swiss-Prot top hits (Blast detail)Scoree value
Q5PQ09 PPPDE peptidase domain-containing protein 11971e-014
Q6DC39 PPPDE peptidase domain-containing protein 11953e-014
Q9BSY9 PPPDE peptidase domain-containing protein 11926e-014
Q9D291 PPPDE peptidase domain-containing protein 11926e-014
A3QRX8 PPPDE peptidase domain-containing protein 11926e-014

TrEMBL top hits (Blast detail)Scoree value
Q9SZZ6 At4g2568011264e-121
Q9SZZ4 At4g2566011202e-120
B9H3G9 Predicted protein8272e-086
C5WUF8 Putative uncharacterized protein Sb01g0306608182e-085
Q8LN31 Expressed protein8155e-085

Arabidopsis top hits (Blast detail)Scoree value
AT4G25680.1 unknown protein11263e-123
AT4G25660.1 unknown protein11201e-122
AT2G25190.1 unknown protein2283e-019
AT5G25170.1 unknown protein2203e-018
AT1G80690.1 unknown protein2061e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  67%
 
111  33%

Unigene MembersMember information