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Information for unigene UN50102
| FASTA Sequence |
| Unigene ID: UN50102 | Length: 833 |
SSR | | GGAAGCGACCAAGGAGGAGGAGGAGGAGGAGAAGAAGCTTCTCTTTTTGAGGCAGATCTGACATCTGTTTCCGAATCTCTTTTTGA
AGTTCTTCAGTGAATCAGCTGTTCAATGGGTTTGTGGGAAGCTTTTCTCAATTGGCTTCGTAGCCTCTTCTTCAAGCAAGAAATGG
AACTTTCTTTGATAGGGCTTCAGAATGCAGGGAAGACATCTCTTGTCAATGTTGTTGCAACTGGTGGTTATAGCGAGGACATGATT
CCTACGGTGGGTTTTAACATGAGGAAAGTGACAAAAGGAAATGTTACTATCAAGCTATGGGATCTTGGTGGTCAACCTAGGTTCCG
GAGCATGTGGGAACGTTATTGCCGCGCTGTCTCCGCCATTGTGTATGTAGTTGATGCCGCAGATCCTGACAACCTAAGTGTCTCCA
AAAGCGAACTCCATGATCTGTTGAGCAAGACTTCTCTTAACGGTATCCCTCTTCTGGTTCTTGGGAACAAGATCGACAAACCTGGA
GCTCTCTCTAAAGAAGCCTTAACCCACGAAATGGAGCTTCAGTCGCTTACAGATAGAGAAGTTTGCTGTTTCATGATATCTTGCAA
GAACTCTACCAACATTGATCAGGTCATTGATTGGCTGGTGAAGCATTCAAAATCAAAGAACTAAAAAACTTCACCAAGAAGAACCA
CACATTCTCTCTTCTCAAGTCCTCTTCCTGTATTGTGTGCCTGATGAAGACTATTTTAAAACTCGTGTGAAAACAAGAGTTTGTCT
CTGTATATTGGATGTGGGATGGTATTCTATTCTAAAGCATTTGCAATTTTTGGAAACTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877709 hypothetical protein ARALYDRAFT_485347 [Arabidopsis lyrata subsp. lyrata] | 934 | 9e-099 |
| NP_190556 ADP-ribosylation factor-like A1C [Arabidopsis thaliana] | 922 | 2e-097 |
| NP_569051 ADP-ribosylation factor-like A1D [Arabidopsis thaliana] | 915 | 1e-096 |
| XP_002532424 ADP-ribosylation factor, putative [Ricinus communis] | 906 | 2e-095 |
| XP_002866698 hypothetical protein ARALYDRAFT_496840 [Arabidopsis lyrata subsp. lyrata] | 906 | 2e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5ZKQ8 ADP-ribosylation factor-like protein 8A | 661 | 2e-068 |
| Q6P8C8 ADP-ribosylation factor-like protein 8A | 661 | 2e-068 |
| Q96BM9 ADP-ribosylation factor-like protein 8A | 657 | 5e-068 |
| Q8VEH3 ADP-ribosylation factor-like protein 8A | 649 | 4e-067 |
| Q9NVJ2 ADP-ribosylation factor-like protein 8B | 648 | 6e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VY57 ADP-RIBOSYLATION FACTOR-like protein | 922 | 2e-097 |
| Q93Y31 ADP-ribosylation factor-like protein | 915 | 1e-096 |
| B9T2F5 ADP-ribosylation factor, putative | 906 | 1e-095 |
| A5C504 Putative uncharacterized protein | 905 | 1e-095 |
| C6T2M2 Putative uncharacterized protein | 898 | 9e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G49870.1 ATARLA1C (ADP-ribosylation factor-like A1C); GTP binding | 923 | 7e-100 |
| AT5G67560.1 ATARLA1D (ADP-ribosylation factor-like A1D); GTP binding | 916 | 5e-099 |
| AT5G37680.1 ATARLA1A (ADP-ribosylation factor-like A1A); GTP binding | 787 | 4e-084 |
| AT3G49860.1 ATARLA1B (ADP-ribosylation factor-like A1B); GTP binding | 710 | 3e-075 |
| AT2G24765.1 ARF3 (ADP-RIBOSYLATION FACTOR 3); protein binding | 304 | 4e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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