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Information for unigene UN50118
| FASTA Sequence |
| Unigene ID: UN50118 | Length: 878 |
SSR | | GGCAATTGAGGAAGGAACACAGAGATCTCGATTCACAGATGTCGTCGTCGTCGTCGTCGTCTTCTCCGAGTGGCGATTTGAGCGAG
AGAAGAGGGATTCCCGCCGCTAAATTCATCCAAGATGTCGAGACTTACCTCTCTCAGTCCAGCCTCGATTCCAACTCTGCTCTCGC
CTTCCATCAAGAAAGGGTTCAGCAGTATAAAGTTGTTGAAATGAAGCTTCTTGCCCAGCAGAGGGATCTTCAGGCTAAAATCCCAG
ATATTGAGAAGTGCTTAGAGGTTGTTGCCACTTTGGAAGCAAGGAAGGGTACTGGTGAGGCCCTTCTGGCGGATTTTGAAGTGTCT
GAAGGAATATATTCACGGGCCTGTATTGAAGACACCGACTCAGTGTGCTTGTGGTTGGGAGCAAATGTCATGCTGGAATATTCCTG
TGAAGAGGCTACAGCCCTTTTGAAAAACAATCTGGAAAATGCTAAAGCCGGCCTGGAGGTTCTTGTGGCTGATTTGCAGTTCTTGA
GGGATCAAGTCACAGTTACTCAGGTGACTATTGCGCGTATCTATAACTATGATTCAGCAAAGGAGGGTTAAACAAGTTACCCCTAC
TGCTATTGCTGCTGCCGACTCATGAATCACAAAGTTCAAATCATGCTCTTGTGTCTTATAAGGAGGTAATATGATTTCTGCGACAC
CGTTTGGTTTGTAACTCTTGTTTTTTTTTTTGCTTTTCTTGATCGAGCTGTGTTTCCGAGACAAACCTATCAATAGAAACATTTAG
CATTTTATTGTTACCTTTTGGAGTTTGGAGACCATCTTGTGTTTTTTTCCGATTGAAGTACTACTACTTGTTTAAGGATGTGGTCA
GTATATCATAGTGTTTGC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002863989 hypothetical protein ARALYDRAFT_495010 [Arabidopsis lyrata subsp. lyrata] | 810 | 2e-084 |
| NP_199762 putative prefoldin subunit 3 [Arabidopsis thaliana] | 807 | 5e-084 |
| XP_002519249 prefoldin subunit, putative [Ricinus communis] | 728 | 8e-075 |
| XP_002279358 PREDICTED: hypothetical protein [Vitis vinifera] | 723 | 3e-074 |
| NP_001067032 Os12g0562900 [Oryza sativa Japonica Group] | 706 | 3e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P57741 Probable prefoldin subunit 3 | 807 | 2e-085 |
| P61759 Prefoldin subunit 3 | 343 | 1e-031 |
| Q5RCG9 Prefoldin subunit 3 | 343 | 1e-031 |
| P61758 Prefoldin subunit 3 | 340 | 3e-031 |
| Q2TBX2 Prefoldin subunit 3 | 335 | 1e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGC8 AT5G49510 protein | 807 | 4e-084 |
| B9RZT0 Prefoldin subunit, putative | 728 | 5e-075 |
| Q2QNJ8 Os12g0562900 protein | 706 | 2e-072 |
| C6T5K5 Putative uncharacterized protein | 700 | 9e-072 |
| C5YPT7 Putative uncharacterized protein Sb08g018270 | 698 | 2e-071 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G49510.1 PDF3 (PREFOLDIN 3); unfolded protein binding | 807 | 2e-086 |
| AT5G49510.2 PDF3 (PREFOLDIN 3); unfolded protein binding | 807 | 2e-086 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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