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Information for unigene UN50124
| FASTA Sequence |
| Unigene ID: UN50124 | Length: 1222 |
SSR | | GGGTCGCGTAAAACCCTAATTCCCATTTCCCCTCTTTCAACCATGGCGACTCCTCCGAATCTAGAGTGCCGGATGTACGAATCCAA
GTACCCCGAAGTCGACATGGCCGTAATGATCCAGGTCAAAAACATCGCGGACATGGGAGCCTACGTGTCACTCCTGGAGTACAACA
ACATCGAAGGCATGATCCTCTTCTCCGAGCTCTCCCGCCGTCGGATCCGGAGTGTGAGCAGCTTGATCAAGGTCGGGAGAATCGAG
CCCGTCATGGTCCTGCGTGTGGACAAGGAGGAGGGGTACATCGATCTGAGCAAGCGCAGGGTTAGCGAGGAGGATATACAGACTTG
TGAAGAGAGGTATAACAAGAGCAAGCTTGTGCATTCTATCATGCGTCATGTTGCCGAGACGCTTTCTATTGATTTGGAGGAGTTGT
ATGTGAACATTGGTTGGCCTTTGTACCGTAAACATGGTCATGCTTTTGAGGCTTTCAAGGTCTTACTGACTGGTCCTGATTCTGTG
CTGGGTTCCCTCACCCGTGAGATCAAAGAAGTTGGGCCTGATGGGCAGGAGGTGACCAGAGTTGTACCTGCTGTTACGGAAGAGGT
GAAAGATGCGCTTGTGAAGAACATTAGGAGGAGAATGACACCACAGCCAATGAAAATCCGTGCTGATATCGAATTGAAATGTTTTC
AGTTTGACGGAGTTGTTCACATTAAGGAAGCCATGAAAAAGGCTGAAGCTGCTGGAAACGAAGACTGTCCTGTTAAGATTAAATTG
GTTGCTCCACCTCTCTATGTCCTTACTACTCAGACTCTTGACAAGGAACAAGGGATTGAAATTCTAGAGAAGGCCATAGCAGTTTG
CACTGAGACAATTGACAAACACAAAGGCAAGCTCGTCGTTAAGGAGGCACCTAGAGCTGTGAGTGAAAGAGATGATAAGATGCTGA
CAGAACACATGGCTAAGCTAAGAATGGACAATGAAGAAATCAGCGGGGATGAAGAAAGTGGAGAAGAGGAAGAAGACACGGGGATG
GGCGAAGTTGATATCGATGGTGGCGCAGGAATCATTGAGTAGTCTTTTCTTTTTAAGTAGAACACCACCAAAAAGATTTGTTTTTT
GTTGTTGTTGTTGTTGATACAAATGTTCTTTCACCCGTTTGAGGGGTTTTAAGTATCAAACATTACATTCATGATCCTATAAAGGT
TTGATTATTTTTTGGGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881712 hypothetical protein ARALYDRAFT_483081 [Arabidopsis lyrata subsp. lyrata] | 1644 | 8e-181 |
| NP_565927 Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis thaliana] | 1628 | 6e-179 |
| AAM61752 putative eukaryotic translation initiation factor 2 alpha subunit, eIF2 [Arabidopsis thaliana] | 1625 | 1e-178 |
| ACU20796 unknown [Glycine max] | 1535 | 3e-168 |
| ACU23758 unknown [Glycine max] | 1534 | 4e-168 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5R493 Eukaryotic translation initiation factor 2 subunit 1 | 739 | 3e-077 |
| P05198 Eukaryotic translation initiation factor 2 subunit 1 | 738 | 4e-077 |
| Q6GL89 Eukaryotic translation initiation factor 2 subunit 1 | 737 | 5e-077 |
| Q5ZLX2 Eukaryotic translation initiation factor 2 subunit 1 | 736 | 6e-077 |
| Q7ZTK4 Eukaryotic translation initiation factor 2 subunit 1 | 734 | 1e-076 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SIZ2 Putative eukaryotic translation initiation factor 2 alpha subunit eIF2 | 1628 | 4e-179 |
| Q8LEV8 Putative eukaryotic translation initiation factor 2 alpha subunit, eIF2 | 1625 | 8e-179 |
| C6TG44 Putative uncharacterized protein | 1535 | 2e-168 |
| C6TLG6 Putative uncharacterized protein | 1534 | 3e-168 |
| B9HHU6 Predicted protein | 1524 | 4e-167 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G40290.1 eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative | 1629 | 2e-181 |
| AT5G05470.1 EIF2 ALPHA; RNA binding / translation initiation factor | 1472 | 3e-163 |
| AT2G40290.2 eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative | 1086 | 1e-118 |
| AT2G40290.3 eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative | 1086 | 1e-118 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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