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Information for unigene UN50171

FASTA Sequence
Unigene ID: UN50171Length: 995 SSR 
TAGTTCATCATATGGTTCAGCTCTTGCTCTTGAAAGGAATGACTCTGATGACAAGCTGGTGATAGAGTGCTGCTAGAGCTGCTCCA
ATGAATGGTCCAACCCAGAAAATCCAATGGTCGTCCCTGGAGTGCTCCTTGTTGTAGATAATGGCAGCTCCAAGACTTCTAGCTGG
GTTGATTCCGGTTCCGGTTATCGGAATTGTCGCCAAGTGTACCAAAAACACTGCAAACCCGATTGGAAGTGGTGCCAAAATTGGGA
CGTGTGAGTCACGGGCGCTTCTCTTGGCGTCGGTGGCGGAAAAGACCGTGTAGACGAGTACGAAGGTTCCAATAATCTCAGCACCG
AGACCAGATCCCTTGGAGTAGCCGGGAGCGACGGTGTTAGCACCGCCACCCGAGAGTCTGGTACGGCGTTGGCTGGAAACCCTTGA
CGACTCCGGCACCACAGATGGCTCCGAGACATTGCATAATCACGTAGAAAACAGCTCTGGTCAGAGACAACTTCCTAGCCAAGAAC
AGACCGAACGTAACCGCAGGGGTTGATGTGTCCACCTGAAATTCCAGCAGTACAGTAGACGAGAGCAAAGATCATGCCACCAAAAG
CCCAAGCGATGCCTTGGATTCCAACAGAGGCGCACATGTTTGGTGCTCTCTTCACTCCCATGACTGTCAACACTGTGATGTAAAGG
AAGAGGAAAGTAGCTATGAACTCGGCGATTCCTGCTCTCCAGAAAGACCACGAGCTCAGCTCTCTCGGCTCGAACAGTGGCGCAGG
TGGTGGCTCTTTGTAGTCCTTGTCGGACTGAGCCGATGTTCCGATGGGCTGCCTCTCCGGGAACTTGTTAGCTCCAACTCTCACAT
CTTCTTCTTTGCCTTCCATATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTTTCAGAGTTCTTTCACTCTAG
AAAGGTTAAAGCGGTGAGCTTTTTACTTCTTCTTTCTTGTTTTGTGTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34288 unnamed protein product [Thellungiella halophila]6266e-063
ABO71659 trans-membrane water channel protein [Brassica juncea]6231e-062
NP_567178 putative aquaporin PIP1-4 [Arabidopsis thaliana]6177e-062
XP_002872953 hypothetical protein ARALYDRAFT_912203 [Arabidopsis lyrata subsp. lyrata]6177e-062
NP_171668 aquaporin PIP1-3 [Arabidopsis thaliana]6132e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q39196 Probable aquaporin PIP1-46173e-063
Q08733 Aquaporin PIP1-36139e-063
Q8LAA6 Probable aquaporin PIP1-56066e-062
P61837 Aquaporin PIP1-16022e-061
P61838 Aquaporin PIP1.16022e-061

TrEMBL top hits (Blast detail)Scoree value
A4URF3 Trans-membrane water channel protein6231e-062
A8MSF6 Uncharacterized protein At1g01620.26131e-061
A9X4U3 Aquaporin PIP16032e-060
B2CZY9 Aquaporin6032e-060
Q39384 Transmembrane channel protein6032e-060

Arabidopsis top hits (Blast detail)Scoree value
AT4G00430.1 PIP1;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 1;4); water channel6182e-064
AT1G01620.1 PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C); water channel6146e-064
AT1G01620.2 PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C); water channel6146e-064
AT4G23400.1 PIP1;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 1;5); water channel6074e-063
AT3G61430.1 PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel6031e-062

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information