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Information for unigene UN50178
| FASTA Sequence |
| Unigene ID: UN50178 | Length: 890 |
SSR | | GCAGAGTTTGAAATGAGTGATGATCAGCACGAGCATGCTGTGGCTGTTGAAAGGCTTGTACCGAGCCTTGCTTCTTTGAGGATTGA
GCTTTGCCCTGAGTACATGAGTGAGAATTGCTTCTGGATGATTTACTTTGTGCTTTTGCATCCTAAACTCACCCAACACGATGCCT
TACTTCTCTCCACTCCTCAGGTAATGTAGTAGTAGCATCTCAGGTTTCATGGGATGTAAAGTTTTTAGCGTGATGTGATTCTTGTG
TTTCATTAAAAAGGTACTCGAAGCAAGAGCAATGTTATCTCATGAGTTACAGAAATCAACCAGAGCACCTGTGGAAGCAGCAGAGA
GTTCTGGAGCTAACGCTGCAGTGGTTGAACCTCTTACCGTGCCTTACAACCCTTCGCAGGAGTCATTAGTTGCTAAAACCGTGAAT
CCGCAGGAGAGTGAGACGGACAAGCATTCAATTGAGAGCAAGGAGGAGATACAAGTCGTTGACAAATCTGTCATTGAAGAAAGAAA
CTCATCAACTGATTCTTCTTCTTCATCTAGATTTGTCAATGTGCAAGCTGAGGACGTAGAAGAAGAAGAAGAAGACGCAGATGATT
GGTTGAACGACGAAGAGAGTTCAGATGCGGTGAGCGGCATGGAAGGAGGAGTAACTACTAAGCATCCTCTTGGTGAAGACGAAGAA
GATGTGTCATTCAGTGATCTAGAAGATGATGAGGACGAGGAAAGAGACGTACCCGTGAGTTCTAAGAGATCTACTAACTCTAGTTC
ACCAGACTGGGTACAGATATAAGACAGCAACGCAGGTCAGGTAAAAAGAGAACAAAAGAATCAAACCATTGTCTTGATGTCGAGGA
AATGTAATACAAATGACCACCTTAGTGTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAA16672 predicted protein [Arabidopsis thaliana] | 276 | 2e-022 |
| NP_569021 BSD domain-containing protein [Arabidopsis thaliana] | 275 | 3e-022 |
| XP_002310888 predicted protein [Populus trichocarpa] | 270 | 1e-021 |
| XP_002320007 predicted protein [Populus trichocarpa] | 260 | 1e-020 |
| XP_002525300 conserved hypothetical protein [Ricinus communis] | 256 | 4e-020 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q75JC9 Uncharacterized protein DDB_G0271670 | 147 | 8e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9FHP0 Genomic DNA, chromosome 5, TAC clone:K14B20 | 275 | 2e-022 |
| B9HFZ2 Predicted protein (Fragment) | 270 | 7e-022 |
| B9IBL7 Predicted protein | 260 | 1e-020 |
| B9SH31 Putative uncharacterized protein | 256 | 3e-020 |
| A9NVK2 Putative uncharacterized protein | 252 | 8e-020 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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