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Information for unigene UN50226
| FASTA Sequence |
| Unigene ID: UN50226 | Length: 818 |
SSR | | GGAGACTCATCATCCTCGGCTTCGACTCGATACTCATTCTCTCCGATTTAGGGATTCCATACTCGCCATGTATCGCACGGCTCGTT
ATGCAAGCGCTAGTGCTGTTGCTACGACCTCTTCTTCTTCTTCTTCTTCTCCAGGTTTCTTAGGCTGGTTGACTGGTGGATCCTCT
GGCTCCCTTGCTTCACTGGACATGCCACTACAGGGAGTATCTCTTCCTCCGCCGCTTCCTGACCGCGTCGAGCCAAGCAAACTCAA
GATCACTACTCTTCCTAATGGCCTCAAAATCGCCTCTGAGATGTCTCCCAATCCGGCAGCTTCTATTGGTTTGTATGTTGATTGTG
GTTCGATCTATGAGGCTCCTTATTTCCATGGAGCAACGCATTTGCTTGAAAGGATGGCTTTCAAGAGCACCACGAACAGAAGCCAT
CTACGTCTCGTCAGGGAAATAGAAGCGATTGGAGGGAACACCTCTGCGTCTGCGTCTCGGGAGCAGATGAGTTACACTATTGATGC
TCTTAAAACCTATGTCCCTGAAATGGTTGAGGTTCTTATCGACAGTGTTAGGAACCCTGCTTTCTTGGACTGGGAAGTCAATGAAG
AGCTACGTAAAATGAAGGTGGAGATAGCGGAACTTGCGAAGAACCCTATGGGGTTTCTCATTGAGGCTGTTCATTCTGTTGGTTAT
TCTGGTGCATTGGCTAATCCTCTGTACGCACCTGAGTCTGCCTTGCACAGATTGAATGGGGAACTCTTGGAAGAGTTTATGACTGA
GAATTTCACTGCTGCACGTATGGTGTTGGCGGCAAGTGGAGTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002894348 hypothetical protein ARALYDRAFT_474319 [Arabidopsis lyrata subsp. lyrata] | 1120 | 2e-120 |
| NP_175610 putative mitochondrial-processing peptidase subunit alpha-1 [Arabidopsis thaliana] | 1104 | 2e-118 |
| AAM65922 mitochondrial processing peptidase alpha subunit, putative [Arabidopsis thaliana] | 1104 | 2e-118 |
| BAE98617 hypothetical protein [Arabidopsis thaliana] | 1104 | 2e-118 |
| NP_001077701 putative mitochondrial-processing peptidase subunit alpha-1 [Arabidopsis thaliana] | 1104 | 2e-118 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZU25 Probable mitochondrial-processing peptidase subunit alpha-1 | 1104 | 8e-120 |
| O04308 Probable mitochondrial-processing peptidase subunit alpha-2 | 1008 | 1e-108 |
| P29677 Mitochondrial-processing peptidase subunit alpha | 827 | 1e-087 |
| P32551 Cytochrome b-c1 complex subunit 2, mitochondrial | 358 | 2e-033 |
| P22695 Cytochrome b-c1 complex subunit 2, mitochondrial | 353 | 9e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MQE5 Uncharacterized protein At1g51980.2 | 1104 | 1e-118 |
| Q0WW81 Putative uncharacterized protein At1g51980 | 1104 | 1e-118 |
| B9HLW1 Predicted protein | 892 | 4e-094 |
| B7FNA0 Putative uncharacterized protein | 890 | 8e-094 |
| B8A9G6 Putative uncharacterized protein | 889 | 1e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G51980.1 mitochondrial processing peptidase alpha subunit, putative | 1104 | 7e-121 |
| AT1G51980.2 mitochondrial processing peptidase alpha subunit, putative | 1104 | 7e-121 |
| AT3G16480.1 MPPalpha (mitochondrial processing peptidase alpha subunit); catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding | 1008 | 9e-110 |
| AT3G02090.1 mitochondrial processing peptidase beta subunit, putative | 272 | 2e-024 |
| AT3G02090.2 mitochondrial processing peptidase beta subunit, putative | 272 | 2e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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