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Information for unigene UN50230

FASTA Sequence
Unigene ID: UN50230Length: 1086 SSR 
GGCTCCTCATTTTAATACATCTCGAAAGCAGAGAGAGAAAAAAAATAAGAGAGAGAGAGATTCAGAGAGAAAGGAGGGAGAAGGGA
GCTATAAGTGGTCTCATCACCACCACTAACAGTTCCATTCGAACATAAACACAAAACGACGTCGTTCCCTCTACCATCCTCTGCAA
TCTCTCCTCTCACCAGTTTTTCTCAGCTTTTTCGGGTTTTAATTTACGAGAAGAGATCTTGTCTACCCGTGGGATTGAAGATCATT
CCCGACGCAATTAACTGCCGAAGATGGTAATGTGGGTCTTTGGTTATGGCTCTCTTGTGTGGAACCCAGGATTTCACTACGATGAG
AAAGTGCTTGGTTTCATCAAGGGATATAAACGTGTCTTTGATCTTGCTTGCATTGATCACAGAGGTACACCAGAACACCCTGCAAG
AACTTGCACACTCGAGAAAGATGAAGAAGCCATATGCTGGGGTGCTGCTTTCTGTGTCCGTGGAGGACCAGAAGAAGAACGTCTGG
CTATGGAGTACTTGGAACGTAGAGAGTGTGAATATGATCTCAAGACATGTGTGGACTTTTATAAGGAAGATGATCCCCTGAAGCCA
TCTGTAACTGGAGTGATAGTATTCACTTCTACTCCAGACAAGGTCTCCAACAAGTACTACCTTGGACCTGCGCCATTAGAAGACAT
GGCAAGACAAATTGCGACAGCCAATGGACCATGTGGTAACAACAGAGATTATCTCTTCCTGCTAGAGAAGGCAATGCACGACATCG
GGCATGAGGAGGATTATGTTATAGAGCTGGCGAACGAGGTGAGGAAAGTTCTCCCGGAGTCCTCGAGGAAGAAAGTGACACCGGTG
AAGGAACCAAGAGCGAGCCGTGTTGCTAACAAGTCCAAGAACAATGTCCCCACGGCTCATAAGATACTTCCTCATCAACCTGAAGC
TGTTGCCACTACGATATAGCTCTTTTAGCTGTCTTTTAATTGGCTTTAGAGGCAAGTGACTTGTGAAAGCAGATCGTTTTGCTTCT
TTTAACAAACTTCGGGTTGTTTTTGAGTAGAGACACGTAATCGTTGTGCGTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869338 hypothetical protein ARALYDRAFT_491614 [Arabidopsis lyrata subsp. lyrata]11761e-126
NP_567871 chaC-like protein [Arabidopsis thaliana]11698e-126
AAM65482 unknown [Arabidopsis thaliana]11609e-125
XP_002283203 PREDICTED: hypothetical protein [Vitis vinifera]8704e-091
CBI20802 unnamed protein product [Vitis vinifera]8704e-091

Swiss-Prot top hits (Blast detail)Scoree value
Q5ZI66 Cation transport regulator-like protein 23281e-029
Q5PPV4 Cation transport regulator-like protein 23226e-029
Q8WUX2 Cation transport regulator-like protein 23217e-029
Q4KMJ1 Cation transport regulator-like protein 23191e-028
Q9CQG1 Cation transport regulator-like protein 23145e-028

TrEMBL top hits (Blast detail)Scoree value
Q84MC1 At4g3129011695e-126
Q8LAB4 Putative uncharacterized protein11606e-125
Q8GY54 At5g262208505e-089
A9PIU2 Putative uncharacterized protein8497e-089
B9NA24 Predicted protein8424e-088

Arabidopsis top hits (Blast detail)Scoree value
AT4G31290.1 ChaC-like family protein11702e-128
AT5G26220.1 ChaC-like family protein8503e-091
AT1G44790.1 ChaC-like family protein5134e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information