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Information for unigene UN50241
| FASTA Sequence |
| Unigene ID: UN50241 | Length: 697 |
SSR | | GATCACCTAGAAAGATAAAACACAAAAGGACAAAGGCATACACATGTTTTTTGAGGTACAAGGAATGAAAAACAATCCTTGCAAAA
TCTCACACGACCCTTTTTCTAAAGAGAAAGGAAGATCTCACAAAACACTATCCTTCTTTCTATCTTCCTCTCTCTCTCACTTTGTA
TATATAAATTTTAAAAAGCATTGAACTTGGGAGTAGAAAGAGGATGAGCACTTCCACTCTTCTTCTAAATTTTCTGAAGAGTCATT
CACTCTCTTCACACCTTTCTTCACCCCTTTCTTCAACCCTTCTATATTCCCCCGAAAAAGCAAAATGAAAATAAAAAAAGACCAAA
CCTTTAAACCTTCTTGACGAAACAGAGGGAAAAACCAACACTTTCTTCTTCTTCTTCTCACGACCTATACACACTGTGATTCCTTT
TGAAGTAGTTGTTGTCCGGTCAAGCCAAAGTGTAGCTTGAAACCGCGACGTTTGCGGGAGATGTTGAGTGAATGTAGACGAACTCT
AGGGACTTCCCGGATTGCAATGAGTGCATCCAGGAAGGTAAACCGAACGAGTTTCCTGATCTAGAGAGTCCCCAGATTGGTCCGTA
GAGATTCTTGATCGAAAGGTTAAGACTTTTCAGAGGTCTAGGTGATTTGTTAATAACAGTCGTTGAGTATCTGTAGTAAGTCCTTC
CCTTTGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176621 endoglucanase 6 [Arabidopsis thaliana] | 405 | 1e-037 |
| AAN31840 putative endo-beta-1,4-glucanase [Arabidopsis thaliana] | 405 | 1e-037 |
| XP_002887890 hypothetical protein ARALYDRAFT_892975 [Arabidopsis lyrata subsp. lyrata] | 405 | 1e-037 |
| BAA21111 endo-1,4-beta-glucanase [Gossypium hirsutum] | 305 | 5e-026 |
| BAC22691 endo-1,4-beta-D-glucanase [Pyrus communis] | 298 | 3e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O23954 Endo-1,4-beta-glucanase (Fragment) | 305 | 4e-026 |
| Q8GTP5 Endo-1,4-beta-D-glucanase | 298 | 2e-025 |
| Q8LJP6 Endo-1,4-beta-glucanase | 298 | 2e-025 |
| Q25B23 Endo-beta-1,4-glucanase | 295 | 5e-025 |
| A9PIJ6 Putative uncharacterized protein | 294 | 7e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G64390.1 AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2); carbohydrate binding / catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 406 | 5e-040 |
| AT4G11050.1 AtGH9C3 (Arabidopsis thaliana glycosyl hydrolase 9C3); carbohydrate binding / catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 281 | 1e-025 |
| AT1G48930.1 AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 164 | 5e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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