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Information for unigene UN50250
| FASTA Sequence |
| Unigene ID: UN50250 | Length: 720 |
SSR | | GGAGACCGCCATGGGAGTAGGCACTGTTGGGTCTTCGGAAGCCATCATGTTAGCCGGACTAGCCTTCAAAAGGAATTGGCAGAACA
AACGCAAAGCTGAGGGTAAACCCTATGACAAACCCAACATTGTCACCGGAGCCAATGTTCAAGTGTGCTGGGAGAAATTCGCTAGG
TACTTCGAGGTGGAGCTAAAAGAAGTGAAGCTTAGTGAAGGTTACTACGTGATGGATCCAGATAAAGCAGCTGAAATGGTAGACGA
GAACACAATCTGTGTTGCTGCCATACTTGGTTCCACACTCAACGGTGAATTCGAAGACTTGTGGCTGATATTGTGAAGGTGCTTCA
CGAGCTTGACACCTTGCCTTCCAAGATATCCAAGAAGATGGGAGCAGAGGATTTCGGAAATGTGATAGGGAAGAAGGTGGAAAGGG
ACATTTTGATGGAAGTCATTGTTGGATGGAGGAAGTTTGTGAAGGAGAGGAAGAAGATGAATGGTGTGTGTTAATTTGAACTGTCT
TCTGTTTGTGTTTGAATGTATTAAATGTCGTCTAATAAAAGAAGAGGTATGTGTGTGTGTGTGAGAACTTGGAGTTTGATGAAAGA
GTTGTGTGTCTGGTATCTATTTGAGACAATAATTGGTTCCGGATTCTATTGTACGCTTGAAACTCATCTTGAGCCTTTGATTATTT
GTAAAATAGTCTTGAAATGCTATTTCCTTGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAS79669 glutamate decarboxylase 2 [Brassica juncea] | 549 | 3e-054 |
| XP_002886996 glutamate decarboxylase 2 [Arabidopsis lyrata subsp. lyrata] | 536 | 9e-053 |
| NP_001117556 glutamate decarboxylase 2 [Arabidopsis thaliana] | 534 | 2e-052 |
| AAL91148 glutamate decarboxylase, putative [Arabidopsis thaliana] | 534 | 2e-052 |
| AAL16126 At1g65960/F12P19_12 [Arabidopsis thaliana] | 534 | 2e-052 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42472 Glutamate decarboxylase 2 | 534 | 8e-054 |
| Q42521 Glutamate decarboxylase 1 | 517 | 7e-052 |
| Q07346 Glutamate decarboxylase | 513 | 2e-051 |
| P54767 Glutamate decarboxylase | 507 | 1e-050 |
| Q54IJ3 Glutamate decarboxylase B | 290 | 1e-025 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6Q4I3 Glutamate decarboxylase 2 | 549 | 2e-054 |
| Q8RXH0 Glutamate decarboxylase, putative | 534 | 1e-052 |
| Q944L6 At1g65960/F12P19_12 | 534 | 1e-052 |
| Q6Q4I0 Glutamate decarboxylase 1 (Fragment) | 530 | 3e-052 |
| A0EJ88 Glutamate decarboxylase | 528 | 6e-052 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65960.2 GAD2 (GLUTAMATE DECARBOXYLASE 2); calmodulin binding / glutamate decarboxylase | 534 | 7e-055 |
| AT5G17330.1 GAD; calmodulin binding / glutamate decarboxylase | 517 | 7e-053 |
| AT2G02010.1 GAD4 (glutamate decarboxylase 4); calmodulin binding | 491 | 7e-050 |
| AT2G02000.1 GAD3 (glutamate decarboxylase 3); calmodulin binding | 485 | 3e-049 |
| AT3G17760.1 GAD5 (glutamate decarboxylase 5); calmodulin binding | 478 | 2e-048 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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