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Information for unigene UN50293

FASTA Sequence
Unigene ID: UN50293Length: 880 SSR 
GGGCGAAATCAACGACTTAAAATCCACTTTCTATCTCCCTCTCGCGTCCGATCTCCTTTCTCTCTCTCTCTCCTCTCTACAACAAA
GTCAACTCTTCCATCTGTCGGAATATGGCATGTCTTAACTGCGACAAAGAGATGACCATGACGACGACAACGGAGGAGAAACCATC
TTCCGATGGCCGAGGAGGTTGGGGTTTCTTCAAGATCCCGTTTCGAAACTCTAGCGGCCGCGGAAACGCAGCATCAAGTGCCGCCG
CCACGTCTTCTTCTTCTTCTTCTACTACATCTTCTCAGCTCCATAACCACCACCAACACCACCACCACCACCATCATCATCAGCTT
GGCTATAACGGGCCCCACGGTGATGGATCGGGTCAAAATCAACACCAGACTCCTTCTCCTTCGGTATCATCGGTAGCTAAGTCGTT
TCTGCCTACGAAACGCAGATTGAAGCTTGATCCGTCGGAGAAACTCTATTTTCCTTATGAGCCTGGAAAGCAAGTGAGGAGCGCTA
TTAAGATTAAAAATACCAGCAAATCACATGTAGCCTTTAAGTTTCAAACAACTGCACCGAAGAGTTGCTTTATGCGTCCACCGGGT
GCTATTCTTGCTCCTGGAGAGACTATTATCGCCACTGTGTTCAAATTTGTTGAGCCTCCTGAGAATAATGAGAAGCCAATGGATCA
AAGGAGCAGAGTTAAGTTTAAGATCATGAGCCTGAAGGTGAAAGGTCCAATGGACTATGTGCCTGAGCTGTTCGATGAGCAAAAGG
ATGATGTGTCTAAAGAGCAAATATTGCGTGTTATCTTTCTGGACCCAGAACGCCCCAACCCTGCACTGGAGAAACTGAAGCGCAGT
AGCAGAGCGGATGCAGCAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567627 vesicle-associated membrane family protein [Arabidopsis thaliana]11624e-125
CAA18709 putative membrane associated protein [Arabidopsis thaliana]10746e-115
XP_002869886 vesicle-associated membrane family protein [Arabidopsis lyrata subsp. lyrata]9966e-106
NP_974584 vesicle-associated membrane family protein [Arabidopsis thaliana]9958e-106
NP_567287 vesicle-associated membrane family protein [Arabidopsis thaliana]8291e-086

Swiss-Prot top hits (Blast detail)Scoree value
Q54GQ1 Myotubularin-related protein DDB_G02900051272e-006
Q0KHT7 Probable serine/threonine-protein kinase CG326661235e-006

TrEMBL top hits (Blast detail)Scoree value
Q8VYN2 Putative membrane associated protein11622e-125
O65410 Putative membrane associated protein10744e-115
Q3E7Q2 Putative uncharacterized protein At4g21450.29956e-106
Q8LPQ7 AT4g05060/T32N4_128291e-086
Q8LAZ8 Membrane associated protein-like protein8244e-086

Arabidopsis top hits (Blast detail)Scoree value
AT4G21450.1 vesicle-associated membrane family protein / VAMP family protein11621e-127
AT4G21450.2 vesicle-associated membrane family protein / VAMP family protein9953e-108
AT4G05060.1 vesicle-associated membrane family protein / VAMP family protein8296e-089
AT5G54110.1 ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED); structural molecule6281e-065
AT3G60600.1 VAP (VESICLE ASSOCIATED PROTEIN); protein binding1352e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  100%

Unigene MembersMember information