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Information for unigene UN50342
| FASTA Sequence |
| Unigene ID: UN50342 | Length: 1222 |
SSR | | GGAGCCATGGCTTTGTGCTCGATCTTGTGCCCTCGTATCCCTGTTCGATTCAGACCCAAACCCATTTCTCCTTTCCTCTCAAAACC
TTTGTTTCCCCTCTCTTATAGGGTTTACTCTTCCCTGCAACCTACCCCCTCTACCAAAGATGAACTTGGAAGTGTAAGCATTGGGT
TTCTGGGTATGGGAATCATGGGTTCTCCAATGGCACAGAACCTCATCAAAGCTGGGTGTGATGTTACTGTGTGGAACCGAACTAAG
AGCAAATGTGGTCCTCTCATCGGATTAGGAGCAAAATACAAGTCTTCTCCTGAAGAAGTGACTGCAGCTTGCGATCTCACATTTGC
AATGCTAGCTGATCCTGAAAGTGCAATCGATGTTGCCTGTGGGAAAGAATGGAGCCGTATCTGGAATTAGCTCAGGAAAAGGGTAT
GTTGATGTCTCAACCGTTGATGCTGCTTCATCGGTGTTAATCAGCAAGCAAATAAAGGACACCGGAGCACTGTTCTTGGAGGCACC
AGTTTCCGGTTCCAAAAAGCCTGCCGAAGATGGTCAGCTGATATTCCTAACTGCAGGTGACAAACTGCTATACGAGAAAGCTGCTC
CTTTCTTAGACATCATGGGAAAGTCAAGATTCTATTTGGGTGATGTTGGTAATGGAGCAGCAATGAAACTTGTCGTCAACATGATC
ATGGGAAGTATGATGGCATCATTCGCCGAGGGAATACTCCTAAGCCAGAAAGTAGGACTTGATCCAAATGTACTGGTCGAAGTAGT
CTCACAGGGAGCCATAAATGCGCCAATGTACTCACTTAAGGGTCCTTCAATGATCAAGTCAGTGTATCCTACAGCTTTCCCATTGA
AGCACCATCAGAAGGATATGAGACTAGCACTGGGACTAGCTGAGTCAGTTTCTCAGTCTACTCCAATTGCGGCTGCAGCAAACGAG
CTTTACAAAGTTGCCAAGTCATATGGTTTGAGCGATGAAGACTTTTTTGCTGTTATTGAAGCACTGAAAGCTGCAAGATCTCAACA
AAGCTAAAGCTTTTAAAAAGATTCGTTCTTTCTTTTCTCATTTCTATGTGGAAAAGAAAAAAAGAGAGTTTCTTTGTTGTTGTTGT
TGTATGTAAAGATGTCAACTTTACTGTTAAAAGCGTCAAACACAATTCAACCTTTGATCTCCTCTGATGTTTTGACTAAAAAGCGA
TAAAAGAAATGTTTGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892961 hypothetical protein ARALYDRAFT_471975 [Arabidopsis lyrata subsp. lyrata] | 1022 | 1e-108 |
| NP_564030 glyoxylate reductase 2 [Arabidopsis thaliana] | 1011 | 2e-107 |
| AAF79475 F1L3.35 [Arabidopsis thaliana] | 1011 | 2e-107 |
| AAM13134 unknown protein [Arabidopsis thaliana] | 1011 | 2e-107 |
| XP_002521394 3-hydroxyisobutyrate dehydrogenase, putative [Ricinus communis] | 892 | 1e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5ZLS7 Putative oxidoreductase GLYR1 | 455 | 2e-044 |
| A4FUF0 Putative oxidoreductase GLYR1 | 452 | 5e-044 |
| Q922P9 Putative oxidoreductase GLYR1 | 452 | 5e-044 |
| Q5RKH0 Putative oxidoreductase GLYR1 | 452 | 5e-044 |
| Q49A26 Putative oxidoreductase GLYR1 | 447 | 2e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RWF1 At1g17650 | 1011 | 1e-107 |
| Q9LNP0 F1L3.35 | 1011 | 1e-107 |
| B9S5X5 3-hydroxyisobutyrate dehydrogenase, putative | 892 | 8e-094 |
| B9MWT8 Predicted protein | 887 | 3e-093 |
| B1Q3F7 Succinic semialdehyde reductase isofom2 | 857 | 1e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G17650.1 GLYR2 (GLYOXYLATE REDUCTASE 2); glyoxylate reductase (NADP)/ phosphogluconate dehydrogenase (decarboxylating) | 1012 | 6e-110 |
| AT3G25530.1 GLYR1 (GLYOXYLATE REDUCTASE 1); 3-hydroxybutyrate dehydrogenase/ phosphogluconate dehydrogenase (decarboxylating) | 635 | 3e-066 |
| AT3G25530.2 GLYR1 (GLYOXYLATE REDUCTASE 1); 3-hydroxybutyrate dehydrogenase/ phosphogluconate dehydrogenase (decarboxylating) | 627 | 2e-065 |
| AT4G29120.1 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein | 258 | 2e-022 |
| AT4G20930.1 3-hydroxyisobutyrate dehydrogenase, putative | 231 | 2e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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