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Information for unigene UN50376

FASTA Sequence
Unigene ID: UN50376Length: 893 SSR 
GGTCCTTCTTCTTCATAGACCGTCCCAAAGAGGATAAAGTCTGTTTCTTTCTGCAGTGAATCCTCCTTCAGCAACTGGGTTTTTGA
AGTTTTCTTACGAAACTTGATTTGGGTTTTCGTTTATTTAGGTTGAATTTTGGTGAAAAAGAGCCTATCTTGTGTTCGATGATATT
CCCCAGAGAGAGAAAAGGCGAAGACTTTTGATTCTTTTCTTTGTATTTGGGTTTTGTGGGAATAGAGAGAGAGAGATGGCAGGTGA
AGATTGGATAGAACTCAAGTTTAGACTCGCAGATGGCACTGACATAGGTCCCACCAAGTACAATCAATCTATGACTGTTTCTTCTC
TCAAAGAGAAGATCATCTCTCAATGGCCTAAAGAGTCAGAAAACATTCCAAAGACTGTAAATGATGTGAAGCTCATCAATTCCGGG
AAGATACTAGGCAACAACAGGACACTTGCTGAATCCAGGCTTCCCGTTGGCGAACTTCCCGGGATGGTCATCACTATGCATGTTGT
TTTTCGCCCTCCTACTTTAGACAAAAAGAGCGAAAAACTGCAGAATGATCCTCCCATGAAGAATCGATGCGCATGCACCATTTTGT
AGCTGCAAGTAAATTGGATCATATAGAGAGATTTTAATCCTTCATGATAAAATAGCACTGGGTTGTGATGCTCCATGGAACAGCTG
AGAAAGTTCCCTTACTGGCATAGACATGAAAAAAAAACAAAGGATCTTCATTACAGGACTTGTTTACATTTGTGTGGTTGATAATT
TATTTTTCATCTTTTTCTTCATTGTTTATCCAAAATGGCTCAAGAAAATGTACTGCAATTCTTGAAGGATGTTTGTTTTTAAATAT
ATATACAATACGTGCAGACACACTGTTTGAAGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173624 membrane-anchored ubiquitin-fold protein 6 [Arabidopsis thaliana]5423e-053
XP_002890488 ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]5388e-053
XP_002285815 PREDICTED: hypothetical protein [Vitis vinifera]4554e-043
AAF86549 F2E2.12 [Arabidopsis thaliana]4455e-042
XP_002513864 conserved hypothetical protein [Ricinus communis]4421e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q8GWJ6 Membrane-anchored ubiquitin-fold protein 65421e-054
Q9SH14 Membrane-anchored ubiquitin-fold protein 54452e-043
Q6Z8K4 Membrane-anchored ubiquitin-fold protein 34068e-039
Q75GT2 Membrane-anchored ubiquitin-fold protein 13252e-029
Q9LSD8 Membrane-anchored ubiquitin-fold protein 43101e-027

TrEMBL top hits (Blast detail)Scoree value
B9RJE5 Putative uncharacterized protein4428e-042
Q9ZRD0 NTGP54104e-038
A6N1C4 Putative uncharacterized protein4061e-037
Q0DXJ1 Os02g0750600 protein4061e-037
B6TMU4 NTGP53971e-036

Arabidopsis top hits (Blast detail)Scoree value
AT1G22050.1 MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR)5439e-056
AT1G77870.1 MUB5 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 5 PRECURSOR)4462e-044
AT3G26980.1 MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR)3117e-029
AT3G01050.1 MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR)2992e-027
AT4G24990.1 ATGP42992e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

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