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Information for unigene UN50386
FASTA Sequence |
Unigene ID: UN50386 | Length: 1134 |
SSR | | GTCGATATGAATCACGTCCTCGCTCGCGGCACTTACGGCACTGTCTACCGCGGTGTCTACGCCGGTCAACAAGTCGCTGTGAAGGT
ATTAGATTGGGGAGAAGATGGTGTCTCAACAGCAGATGATCTCCGCATTTCCTTCGAACAAGAGGTTGCCGTCTGGCAGAAGCTCC
ATCATCCCAACGTTACCAAGTTTATAGGAGCATCCATGGGAACCTCTGATCTGAAGATCCCTTCTTCTAGTGATTCTCTTGGACAT
GGCAACTCTGCTCATCCTGCCAAGGCCTGTTGTGTTGTCGTTGAGTATGTTGCTGGTGGCACCCTCAAGAAGTTCCTTATCAAGAA
GTATCGCACCAAACTCCCCCATCAAGGATGTCATTCAGCTCGCTTTGGATCTCGCTAGAGGGCTGAGTTACCTCCACTCCAAGGTG
ATTGTACATCGGTACGTGAAGTCAGAGAACATGTTACTGGAGCCTAACAAGACGCTCAAGATTGCTGATTTCGGAGTCGCTAGAGT
CGAGGCTCAGAACCCTCAAGACATGACCGGTGAAACTGGAACTCTCGGCTACATGGCACCTGAGGTTCTAGAAGGAAAGGCTTACA
ACAGGAAATGCGATGTGTATAGCTTTGGTGTATGCCTCTGGGAAATATACTGCTGCGACATGCCCTACGCTGACTGTAGTTTTGCT
GAGATCTCTCATGCCGTTGTTCATAAGAATCTGAGACCAGAGATTCCGAAATGCTGCCCACAGTCGGTGGCAAACATAATGAGGAG
ATGCTGGGACCCGAATCCAGACAAGCGACCGGAGATGGAGGAGGTAGTGAAGCTGCTTGAAGCGGTAAACACAAGCAAAGGCGGGG
GAATGATACCACCCGACAAGTTTCAGGGGTGCCTCTGTTTCTTCAAACCTCGTGGCCCCTAATCTCTCTCTCCCTCTCTCTCTCTC
CCCCTTGGCTCTGAATATTCTTGAGAGCTGCGTGATTATTTTTTATTCCGAATTTTTGTCGAGACATTGGAGTTGGATTGGTGTGG
TCTTTGTCATAACAACCCATCTCTCTCTATATATGTATTTATACTACTAAGTACACAGTCCTGTTGTGTATAAAAACTGATGATAA
AAAGCTTTCTTTCTTT
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GenBank top hits (Blast detail) | Score | e value |
XP_002878508 hypothetical protein ARALYDRAFT_486830 [Arabidopsis lyrata subsp. lyrata] | 961 | 1e-101 |
NP_191885 protein kinase family protein [Arabidopsis thaliana] | 958 | 2e-101 |
ABK06454 flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] | 958 | 2e-101 |
BAJ33752 unnamed protein product [Thellungiella halophila] | 958 | 2e-101 |
AAM63482 ATMRK1 [Arabidopsis thaliana] | 951 | 2e-100 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q2MHE4 Serine/threonine-protein kinase HT1 | 371 | 1e-034 |
Q9ESL4 Mitogen-activated protein kinase kinase kinase MLT | 297 | 5e-026 |
Q05609 Serine/threonine-protein kinase CTR1 | 296 | 6e-026 |
Q9NYL2 Mitogen-activated protein kinase kinase kinase MLT | 296 | 6e-026 |
Q54H45 Probable serine/threonine-protein kinase drkB | 291 | 2e-025 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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