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Information for unigene UN50401

FASTA Sequence
Unigene ID: UN50401Length: 996 SSR 
GGGACCAAATCTCCTCCTCCTCCTCACGGTTCCTGTCGTAAAAACTCTTTCTTCTTACTATCTTTCCAAGAAAAGTTGTTGTATCA
GTGATTTGCTGTTGGAATAAAGGTTGCAATGGCGAGGATAAAGCCTCAGGCTCTTCTTAATCAAAGCAAGAAGAAAAAGGGTCCAA
GTCGTATAAGTATCTCCACGATCGTCGTGTGTAATCTTGTAGTTGCTGTAGTCGTACTTTCCTTGGTCACTACTTATCGTCATTGG
TCCCAGAGGTCAAGAAACACACTTGAAACCCAGAGCCAGAGTCATAGATTTGAGGACACAAACGCTGCATCAGAACAAAAGAGTTA
CGATCTTCCTGGTTATGCTGATATAAACACATCAAAAGGTCTCATAACTGTGGAACTCTTTAAAGATGCTTCCCCTGAAGCTGTCG
ACCGGTTTCTAGATCTATGTCAAAAAGATCACTTCAAGGGAATGCCGTTTCATTGGGTTATAAAAAACTACTTGGTGCAAGCTGGT
CACTCCAAGAGCTCGATACCTGTTGAAGAATGGACATCTAAAGGAAAGCTCCGTGGTCGCCTTAACACAAGCCCAAAACATGAAGC
ATTCATGTTGGGGACACCAAAAACAAAAAGGGAACAACAACAATAAGGACTTCGAGCTTCTGATCACAACGGCCCCAATCCCTGAT
TTGAATGATCAGCTTATAGTGTTTGGAAGAGTACTTAAGGGAGAGGATGTAGTACAGGAGATTGAGGAAGTGGATACAGATGAGCA
TTACCAGCCGAAATCACAAATAGGGATCATTAGCGTTATACTGAAACGAGAATTATGAAAAAAAAATGAAAATCTCTCTTCCTCTG
TATATGAGGCCCATCTTCATACTCACTGTTTGTCAAAATCCTCTTTTGAGGGGTTTTTTTTTTTAAACTGATTATTTCCCTTTGTT
TTGTAATTTTATTTGATCTTCTTGAGGAAATAGAATCTTTGTTTTTGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882485 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis lyrata subsp. lyrata]7952e-082
NP_187319 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]7763e-080
XP_002316040 predicted protein [Populus trichocarpa]6052e-060
XP_002311384 predicted protein [Populus trichocarpa]6024e-060
XP_002277818 PREDICTED: hypothetical protein [Vitis vinifera]5882e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q94A16 Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial3971e-037

TrEMBL top hits (Blast detail)Scoree value
Q9C835 Putative uncharacterized protein At3g666547762e-080
B9HX13 Predicted protein6051e-060
B9HIP0 Predicted protein6023e-060
C6TD68 Putative uncharacterized protein4482e-042
C6T7D2 Putative uncharacterized protein4446e-042

Arabidopsis top hits (Blast detail)Scoree value
AT3G66654.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein7761e-082
AT3G66654.3 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein7761e-082
AT3G66654.2 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein7761e-082
AT2G47320.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein3979e-039
AT3G44600.1 CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase1173e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information