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Information for unigene UN50402
| FASTA Sequence |
| Unigene ID: UN50402 | Length: 898 |
SSR | | TTATTGCAGAGAGAGAGAGAATTCCAGAGCAGCTGTAATGGCGATTCCAATGGCAACGGCCACACCAACTGACTCCGTGAGTAGAG
TTTGGAGCATGTCTTCTCTCAGATCATCTCTTCCCTCAGCCGTAACTTGCCGTCTACCTTCCTCGTCCCCTCGCCGTCCCGTCACT
CTCCGCCTCCCCATCTCAACTCCTACATCTCTCCCATCTTTCTCCGGTCTCTCTCCGGTCAATCCTCTCATCTCAACCGGACTCCC
AGGTTGGAAAAGCTTCGAGGACGGGTTCAAGATCATCGACGGCGGTGGTCGCGTGTACGCCATGAGACACGGGAGGAGAGTCCCGA
AGCTGAACAGACCACCTGACCAGAGGAAGGCTCTTCTCCGTGGGCTCACGACGCAGCTGTTGAAGCACGGGAGGATCAAGACGACT
CGAGCTAGAGCAAGTGCGATGAGGAAGTTTGTTGATAAGATGATTACTCTCGCGAAAGATGGTTCTCTGCACAAGCGAAGGCAAGC
TCTGGGGTACATCTACGAGAAGCAGATCGTTCACGCGCTGTTCGCTGAGGTTCCGGATAGATACGGGGAGAGGAATGGTGGGTACA
CGAGGATCATTAGGACTCTTCCTAGGCGTGGTGATAATGCTCCTATGGCGTATATTGAGCTTGTTTAAGTGTTTGTTGTCCTTTTT
TATTGCGTAATTGCTTGACGTTTGGTTTTGTAATTGACGGACTTTGGTTACATGTTTGAGATGGTTCCTTGAGTTTTTTCTGGTTA
AAAGTTGATACCAGATGGTCTAGAACTCTTTTATGTCATTAGGTTTTGGATTTGTTCTGTTCGTCTTTGTAATGCAAAATCAGTGC
TAAGTCTAGCTAGCACTACATGCTTCGGAAGTTTTAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877962 hypothetical protein ARALYDRAFT_485818 [Arabidopsis lyrata subsp. lyrata] | 979 | 6e-104 |
| NP_190989 50S ribosomal protein L17 [Arabidopsis thaliana] | 978 | 8e-104 |
| AAM63452 ribosomal protein L17-like protein [Arabidopsis thaliana] | 963 | 4e-102 |
| XP_002275983 PREDICTED: similar to 50S ribosomal protein L17, chloroplastic [Vitis vinifera] | 736 | 9e-076 |
| XP_002519977 ribosomal protein L17, putative [Ricinus communis] | 734 | 2e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M385 50S ribosomal protein L17, chloroplastic | 978 | 4e-105 |
| O80363 50S ribosomal protein L17, chloroplastic | 712 | 3e-074 |
| B1XJI3 50S ribosomal protein L17 | 436 | 3e-042 |
| B0C429 50S ribosomal protein L17 | 433 | 6e-042 |
| Q8DMK9 50S ribosomal protein L17 | 429 | 2e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S1V8 Ribosomal protein L17, putative | 734 | 1e-075 |
| C6T088 Putative uncharacterized protein | 699 | 1e-071 |
| B7FGK1 Putative uncharacterized protein | 695 | 4e-071 |
| A9PC28 Putative uncharacterized protein | 679 | 3e-069 |
| C6TLN4 Putative uncharacterized protein | 677 | 4e-069 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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