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Information for unigene UN50417

FASTA Sequence
Unigene ID: UN50417Length: 812 SSR 
GGGTAAACGAAAGACGAAGTTAATTAGTAATAATCACACACTAATATCATAATCAGAGCCAATAGAAAGAAAGAGAGAGAGAGATC
TGAAAGATGAAGGCGGAGAAGAGTCCGATTCAGACCGTGACGTCGTGGATTCGCCGGCAGCCACCGAAGGTTAAGGCGTTTCTTTG
TGTGGTTACGGCAATGACGATCCTCGTCTTCCTTAGGGTGATTGTACACGAGCACGACAACCTTTTCATCGCGTCCGAGGCTGTCC
ATGCTGTTGGGATCTCTGTTCTTATCTACAAACTCACCAAGGAGAAGACATGCGCTGGGATATCTCTCAAGACGCAGGAGCTAACG
GCTTTGTTTCTGGCTGTGCGGTTGTATTGTAGCTTTGTAATGGAGTTTGATCTTCACATCATAAACAGGCTCTTTTGGGCCTTCTG
TGTTTATCTTGAAGCTGTTTCAGTTCTTCCTCAACTAAGAGTCATGCAGAACACTAAGATCGTGGAATCGCTAGGTTCTTGAGTTG
TGCACACTGGATCCTTCAGGTGTTGGATACCAGAGGGAGGTTGCTGACTGCATTAGGGTATGGATTATGGCCTTTAATGGTCCTCC
TCTCTGAAATTATCCAAACTTTCATCCTTGCAGATTTTTGCTATTACTATGTTCAGAGTTTAATGGGTGGACAGCTCGTTCTTCGT
CTTCCTTCTGGTGTGGTGTAAGAAGCTTTATTAAAGGATTGCTTGAGCTTTTTTAAAAACTTTTAATTTTACTAGACTTTGAGATG
TAATTTAATACTTTTGCTAGCAAACAACCCTTGGCTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893082 hypothetical protein ARALYDRAFT_312925 [Arabidopsis lyrata subsp. lyrata]4903e-047
NP_173426 ER lumen protein retaining receptor-like protein [Arabidopsis thaliana]4804e-046
AAF79915 Contains similarity to ER lumen protein retaining receptor from Caenorhabditis elegans gi|6686285 and contains ER lumen protein retaining receptor PF|00810 domain [Arabidopsis thaliana]4804e-046
XP_002889042 ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata]4473e-042
NP_177704 ER lumen protein retaining receptor family protein [Arabidopsis thaliana]4348e-041

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LNS6 T20H2.24 protein4803e-046
Q84TL5 At1g757604346e-041
Q9LR15 F10A5.54346e-041
B9H144 Predicted protein4337e-041
B4FK71 ER lumen protein retaining receptor C28H8.44274e-040

Arabidopsis top hits (Blast detail)Scoree value
AT1G19970.1 ER lumen protein retaining receptor family protein4802e-048
AT1G75760.1 ER lumen protein retaining receptor family protein4343e-043
AT2G21190.1 ER lumen protein retaining receptor family protein4139e-041
AT4G38790.1 ER lumen protein retaining receptor family protein4084e-040
AT3G25160.1 ER lumen protein retaining receptor family protein2812e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information