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Information for unigene UN50433
| FASTA Sequence |
| Unigene ID: UN50433 | Length: 883 |
SSR | | GGGAGGGAAAGAGTTACCTACCTATTACCATCTATCTCTTTCTCTCTCTCTCTATCGAGCTTTGTCTCCTCCTCCTGTTCTCATGG
AAGCCTCACCCAATGATCGCCTTCATTTCGGCATAATGGGTTTCGGGTGCGACCATTACAATAGGAGATGTCAAATCAGAGCTCCA
TGCTGCAACGAAGTCTTCCCTTGTCGCCATTGTCACAACGAGAGCACTAGCACATTGCGTAATATCTATGACCGTCACGAGCTTGT
TCGTCAAGATGTTAAACAAGTGATTTGCTCTGTTTGCGATACAGAGCAGCCGGTGACTAAAGTTTGCACCAACTGTGGTGTCAACA
TGGGAGAATACTTCTGCGATATCTGCAAGTTCTATGATGATAATACTGAAAAAGAACAGTTCCATTGTGATGACTGTGGAATTTTG
CTGTCCTATTTGCTCGAGGTCAGTGATTGATATGTCAAAAACATGGCAGAGAACGGATGAAGAGATTGAAGCTACTTCTATGCCTT
CAGATTACCGCGATAAGAAGGTTTGGATACTGTGCAACGACTGTAACGACACAACAGAGGTATACTTCCATATAATCGGTCAGAAA
TGTAGACACTGTAGATCTTACAACACCAGAGCCGTCGCACCTCCTGTCCTTCCTCAATGAAAACACCAAACATCTTTCATGTATTG
CCACCAGAAAGCAACCAAAGAAAAAAAAACTCTGATCAATGATTCAATATGATCATTGGTCACAAAAGCAAGACTCACATTTGTCT
TCTTCATGATTCTATTTGTTGTTGTTCTTATATGATTATGTTTATTACCATTTATATTTATGTGTGAGAAAGCCAGGATAATGTAT
AATATATATATTCTTGATCCAGG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002871827 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 611 | 3e-061 |
| NP_197366 ring finger and CHY zinc finger domain-containing protein 1 [Arabidopsis thaliana] | 602 | 3e-060 |
| XP_002276039 PREDICTED: hypothetical protein [Vitis vinifera] | 557 | 5e-055 |
| ACU18576 unknown [Glycine max] | 552 | 2e-054 |
| ACU23903 unknown [Glycine max] | 543 | 2e-053 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96PM5 RING finger and CHY zinc finger domain-containing protein 1 | 242 | 8e-020 |
| Q9CR50 RING finger and CHY zinc finger domain-containing protein 1 | 208 | 7e-016 |
| O14099 Uncharacterized RING finger protein C2F3.16 | 169 | 2e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZK0 Putative uncharacterized protein At5g18650 | 602 | 2e-060 |
| C6T9S4 Putative uncharacterized protein | 552 | 1e-054 |
| C6TLW1 Putative uncharacterized protein | 543 | 1e-053 |
| B9HMP9 Predicted protein | 530 | 5e-052 |
| B9RT06 Zinc finger protein, putative | 519 | 9e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G18650.1 zinc finger (C3HC4-type RING finger) family protein | 602 | 1e-062 |
| AT3G62970.1 protein binding / zinc ion binding | 469 | 3e-047 |
| AT5G22920.1 zinc finger (C3HC4-type RING finger) family protein | 383 | 3e-037 |
| AT5G25560.1 zinc finger (C3HC4-type RING finger) family protein | 375 | 3e-036 |
| AT5G25560.2 zinc finger (C3HC4-type RING finger) family protein | 375 | 3e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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