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Information for unigene UN50443

FASTA Sequence
Unigene ID: UN50443Length: 972  SNP
CTTCGTAGAAATCGTTATTATGGCTGCACAGTCGCTATCGCTTCCTCTCGCCGGCAGAGTAGCCATAGTCACCGGCTCTTCTCGTG
GTATCGGAAGAGCCATAGCGATCCACCTCGCCGAACTCGGTGCGAGGATCGTTGTCAATTACACAACTAAATCGGCAGACGCCGAG
ATTGTCGCGGCGGAGATCAACGGCCTTCCATCCCCCGGAAATGATGGACCGAGAGCGATCGTGGTTCAGGCCAACGTCTCAGAGGC
AAGCCAGGTGAAATCGCTTTTCGATGCGGCGGAGAGCGCCTTCGAGTCGCCGGTTCATATTCTGGTTAACTCGGCGGGAGTACTCG
ATCCCAAGTACCCTTCCATCGCAAACACATCGGTCGAAGATTTTGATCGCACTTTCAGTGTCAATACAAAAGGGGCGTTTCTTTGC
AGCAAAGAAGCTGCCAATAGGCTCAAAAAGGGAGGCGGTGGTCGGATCATACTCCTCACATCTTCCATGACCCGAGGTTTGAAGCC
GGGATTCGGTGCATATGCAGCGTCAAAAGCAGCTGTGGAAACTATGGTTAAGATTCTAGCGAAAGAGCTCAAAGGAACAGGAATCA
CTGCAAACTGTGTAGCTCCGGGACCCATCGCCACTGAGATGTTCTTTGAAGGAAAGAGCTCGGAGTTGGTGGAGAATATAGCCGCA
GAGAATCCTTTTGGGAGAGTCGGCGAAGTTAAAGATGTGGTGCCTCTTGTTGGGTTCTTGGCTGGCGATGGTGGTGAATGGATCAA
CGGTCAGATCATTCCTGTTAATGGTGGATATGTGTAAAAGGATTGGTCTTTAGTAGCCTCTTTGCTGTTCTTTTGAGGCTTACTGA
TGATATGTTTGCAAATGTGTTGTTATATAACAATAATAACCAGATAATGATTTTGATTCGGTGCTCAGTTAGAAAGATAACCTAAA
TGTATGAGAGAATTGGTTCTTAGTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187048 3-oxoacyl-[acyl-carrier protein] reductase [Arabidopsis thaliana]11373e-122
XP_002882323 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]11151e-119
XP_002871809 hypothetical protein ARALYDRAFT_909830 [Arabidopsis lyrata subsp. lyrata]9465e-100
BAB09479 Brn1-like protein [Arabidopsis thaliana]9332e-098
XP_002282201 PREDICTED: hypothetical protein [Vitis vinifera]9313e-098

Swiss-Prot top hits (Blast detail)Scoree value
Q08632 Short-chain type dehydrogenase/reductase7751e-081
P52037 Uncharacterized oxidoreductase ygfF3503e-032
Q5HGK2 3-oxoacyl-[acyl-carrier-protein] reductase2786e-024
P0A0H9 3-oxoacyl-[acyl-carrier-protein] reductase2786e-024
P99093 3-oxoacyl-[acyl-carrier-protein] reductase2786e-024

TrEMBL top hits (Blast detail)Scoree value
Q9SQR4 Putative short-chain type dehydrogenase/reductase11372e-122
Q9FK50 Brn1-like protein9331e-098
B9I5Y9 Predicted protein9186e-097
Q3LHL1 Short chain dehydrogenase9007e-095
B9SHH3 Short-chain type dehydrogenase, putative8953e-094

Arabidopsis top hits (Blast detail)Scoree value
AT3G03980.1 short-chain dehydrogenase/reductase (SDR) family protein11381e-124
AT5G18210.1 short-chain dehydrogenase/reductase (SDR) family protein8753e-094
AT3G04000.1 short-chain dehydrogenase/reductase (SDR) family protein8638e-093
AT4G13180.1 short-chain dehydrogenase/reductase (SDR) family protein8565e-092
AT1G24360.1 3-oxoacyl-(acyl-carrier protein) reductase, chloroplast / 3-ketoacyl-acyl carrier protein reductase2794e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  33%
 
103  33%
 
61  11%
 
82  22%

Unigene MembersMember information