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Information for unigene UN50479

FASTA Sequence
Unigene ID: UN50479Length: 993 SSR 
GGGAGAGTAAACCAGAGAGACAGAGAAAGACTTGTGACACCTTACACCCATGGCTGCCAAACACATGTTTATGATTTTCCTCTTTA
TATACACAGAAGAAAGATCAAAACATATCACTTGCAGAGTCTTCTTAAAGAAAATAAACATAACATGACAACTTTTGAGGAAAGCT
CTGATTCGGAGGTTATACACAAGCATCTCTTTGAGGACTTGATTATCCCTGATGGTTTCATGGAAGATTTTCTCTTTGATGATTCC
GCTTTTGTGTCAGGACTCTTGTCTCTAGGACCCTTTAACCCAGTTCCTAAACTAGAGCCTAGTTCACCGGTTCTTGATCCAGGTTC
CTATGTCCGAGAGTTTCTTCAAATGGAAGCATCATCATCATCATCATCATCATCAACAACAACAGTAACTACAACATCACCTGAGG
TTGAGACTGTCTCAAACCGGAAAAGACCAAAGAGGGTCGAAGAGACTAGACACTACAGAGGCGTGAGAAGGAGGCCATGGGGAAAA
TTTGCGGCAGAGATTCGAGATCCGGCCAAGAAAGGATCTAGGCTTTGGCTAGGGACATTTGAGAGTGATATTGATGCTGCAAGAGC
TTATGACTACGCAGCTTTTAAGCTCAGGGGAAGAAAAGCTGTGCTCAACTTCCCTTTGGATGCAGGTAAGTATGATGCTCCGATCA
ATTCTTGCCGGAAGAGGAGAAGAAACGATGTACCGGAGCCTCAAGGAACAACTATGAGTACTAATTCATCATCTTCATCAAACTAA
TGGGACTAGTCATGCTTAAGTTTGACTAATGTAGATAAATATCTAAGTATGTGAAGCATCATGTATAGAGCCAAGAAAAATATTAG
ATTAGTGTAGTGAATAAGTGTTGCAAAATATGTACTAAAGAGTCCTTGTAACACAATGGACTTTATGGTTAGATTGGGAGGGTAAC
ACCGGATTGTGGATTAATCAGTTGAGATGTACAAAAAGTATGAATCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200967 ethylene-responsive transcription factor ERF107 [Arabidopsis thaliana]9133e-096
AAM63150 ethylene responsive element binding factor-like [Arabidopsis thaliana]9018e-095
ADF57182 AP2/ERF transcription factor [Brassica napus]8453e-088
XP_002866444 hypothetical protein ARALYDRAFT_496326 [Arabidopsis lyrata subsp. lyrata]8382e-087
ADF57183 mutant AP2/ERF transcription factor [synthetic construct]8336e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q9FKG2 Ethylene-responsive transcription factor ERF1079131e-097
Q9LY05 Ethylene-responsive transcription factor ERF1066488e-067
O80341 Ethylene-responsive transcription factor 53153e-028
Q8VY90 Ethylene-responsive transcription factor ERF1053055e-027
Q40478 Ethylene-responsive transcription factor 52921e-025

TrEMBL top hits (Blast detail)Scoree value
D6Q0A5 AP2/ERF transcription factor8452e-088
Q6V5I2 AP2 transcription factor6614e-067
Q6V5D3 AP2 transcription factor6596e-067
Q6V5B8 AP2 transcription factor6552e-066
Q6V5G9 AP2 transcription factor6507e-066

Arabidopsis top hits (Blast detail)Scoree value
AT5G61590.1 AP2 domain-containing transcription factor family protein9131e-098
AT5G07580.1 DNA binding / transcription factor6532e-068
AT5G47230.1 ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5); DNA binding / transcription activator/ transcription factor3153e-029
AT5G51190.1 AP2 domain-containing transcription factor, putative3054e-028
AT5G61600.1 ethylene-responsive element-binding family protein2912e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
75  100%

Unigene MembersMember information