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Information for unigene UN50484
| FASTA Sequence |
| Unigene ID: UN50484 | Length: 1291 |
SSR | | GGACACAACCGGTGTTGGGGTTGATAAGCCGAATCCATGGGCATTCGATACTACTCAGTTCGATAACATTCTCAAGAAGTTGAAAG
TGCAAGCAGCTCCTAGCAAGAAAGATGATGCTTCGGACAAGGAAGCTGAAAGTGAAGATGCAGCCGCAAAATCTATGCCTGCCGTG
TCCAAGTTTGCTAAAGTTACTCGTCCACAGGGAAGGTATAAACGTAGAGAGAAGGGGAAGCTTGTCAATTCTTATTCTTCTAAAGA
TCTTGAAGGCATACTTGTTAAGCGAACTGAGGAGCCTTCTCCTGCTGTTTGTGACATAGCAGATACTATGGAGATTGAAATTATAT
CTGAGGACCAACATGCTAGTGTTACAGAACAGAGAATTGAAGAACCATCTTCTGACTGGTGGGGATTAAAATCCGGGTTTGTCTCG
GGCGGTCTTCTTGGAGCCAAGTCCGGCAAAAATAAATCATCCAAGTCTAAGGAGAGAAAAATGTTTTGTGAGGACGATCAAGAGAA
TCTTTACAACATGGTTCAGGATAAAGCCACAGCTGGAAAACAAGGACTTGGTATCAAAGACCGTCCAAAGAAGATTGCTGGTGTTC
GTTACCAAGGGAAGAAAACATCTTTTGATAACAGTGATGATGATGATGATGATGATGATAATGATGATGAAGAGGAAGAAGAAGAG
AGTGACGAGGATGATGCCAAGGACTCTGTTATCGAAAATTCTGTCCAAGCAAAAAGGAAGCGAGAAGAGAGTGAAGAAGAAGACGA
CGAGGACTCTGTTATTGAAAACTCTCTCCCAGCTAAAAGGAAGCGTGATGAAATCATTGAACCCAAAATCAAGTTGAAGAACCTAG
GCAAACAGATTCTTAAAAAGGTCGCTGGTAGTAGCGGATCAATGAAGCTGAAACAGCTTAAATCTATGATTGATGAACAAGCACCA
TCAATTCTCTCAGAGTTCTCTTCAAGGAAAGATGCTATTGCTTACTTGAAACTTAAGATGGAGCGAAGTGACAAGTTTATTGTGGA
GGGAAAGAAAATCAGTCTCGTATCAAAAAAGAAGTGAGTGAGGACGAATATCATTATACCTGCCTGCGTAGGAAAGTGGAGATTAG
GGTAAGTTTTGTTACTAATCAACATCAGTCTGTATAACAAGTATCATCCTTTTTAAAGATGTGTTTTATAATATATTTATACATTA
TATGAGAGTTATGCATAAAACTCTACAATAATCTCTTCTATTTAAGAGCAGTTGGAATACATGATTTATTTGAACATATGGTAAAA
C
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAF24571 F22C12.25 [Arabidopsis thaliana] | 1235 | 2e-133 |
| NP_001031225 D111/G-patch domain-containing protein [Arabidopsis thaliana] | 1045 | 2e-111 |
| NP_564820 D111/G-patch domain-containing protein [Arabidopsis thaliana] | 1023 | 9e-109 |
| XP_002534350 pin2-interacting protein x1, putative [Ricinus communis] | 789 | 1e-081 |
| XP_002303609 predicted protein [Populus trichocarpa] | 776 | 4e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54QQ2 Uncharacterized protein DDB_G0283697 | 146 | 2e-008 |
| Q9DE13 Bromodomain adjacent to zinc finger domain protein 2B | 136 | 3e-007 |
| P25980 Nucleolar transcription factor 1-B | 132 | 8e-007 |
| A2ARP9 Cation channel sperm-associated protein 2 | 129 | 2e-006 |
| P38996 Nuclear polyadenylated RNA-binding protein 3 | 129 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SH49 F22C12.25 | 1235 | 2e-133 |
| Q2V4F5 Putative uncharacterized protein At1g63980.2 | 1045 | 2e-111 |
| Q940M0 At1g63980/F22C12_9 | 1023 | 6e-109 |
| B9T7Y1 Pin2-interacting protein x1, putative | 789 | 8e-082 |
| B9GWV7 Predicted protein | 776 | 3e-080 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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