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Information for unigene UN50507
| FASTA Sequence |
| Unigene ID: UN50507 | Length: 863 |
SSR | | AGTGTATGTTCCACTTAACTATTCAATCAGAGTAAACCAAATAGATAAAACTCATACACGAAGAGTGGAATTAATACACTGTATAA
AAAGAAAAATCAATCAACCATAAAGAGAAAATGCGAAATTCAATGTTATGTGATTCCCCCGTTCCTGACATTTCCTCTTTAACTTG
GAGGTTTCTCAGTAACTTTCTGGGCAATCCAGCCAAGCCCATCATGCAACCCTTCTCCAGTGACTGCACAGCTTGCTTGAATGTGC
CAATCATGGTTCTTGATGCTGTGAAGGTTAAGCGCGTCCGTGATCTCAGCTGGGCTCATAGCGTCCTTCAGGTCCTGTTTGTTTGC
GAACACGAGTATCACCGAGTTCTGAAGATCCTCGTGACCGAGCAATCTGGATAGCTCATCTCTCATCAAAGAGATCCTGGCTCTGT
CTGTGCTGTCGATAACCACGATTACAGCGTTTGTGCCTCTGTAGTACGTTGCCCATGATGTTCTGAGCCTGTCTTGCCCGCCAAGA
TCCCAAACCTCGAAGCGGATGTTCTTGTAAACGAGCTCTTCGACATTGCTTCCAACAGTAGGATGAGTGGTGACAACTTCACCCAA
GTGGAGCTTATAAAGCGTCGTCGTTTTGCCGGCGTTATCCAAACCAACGACGACGATCTTATACTCTTTCGCAGGGAACATCATGA
ACCAAAACCTCGATGCGAATGCTCCCATCCTCTCTCTCTCTCTTCTGACTGGATTTAGCAGAAAGTGGCGGAGGCAACGGCGATGG
TGCGTGGTTTGATCTGAATCGGGAAAATATGAAAATTTTAGTTTGGGAGGTTGCTTGCTTATCGATCTGGGTGGGATGGGGGTATC
CTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188935 ADP-ribosylation factor C1 [Arabidopsis thaliana] | 908 | 1e-095 |
| XP_002885533 ADP-ribosylation factor C1 [Arabidopsis lyrata subsp. lyrata] | 904 | 3e-095 |
| XP_002322463 predicted protein [Populus trichocarpa] | 884 | 6e-093 |
| XP_002517045 ADP-ribosylation factor, putative [Ricinus communis] | 877 | 4e-092 |
| XP_002283837 PREDICTED: hypothetical protein [Vitis vinifera] | 871 | 2e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q55AD9 ADP-ribosylation factor-like protein 5 | 583 | 2e-059 |
| P11076 ADP-ribosylation factor 1 | 548 | 2e-055 |
| P19146 ADP-ribosylation factor 2 | 547 | 3e-055 |
| Q9Y689 ADP-ribosylation factor-like protein 5A | 540 | 2e-054 |
| P51646 ADP-ribosylation factor-like protein 5A | 540 | 2e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LIK1 ADP-ribosylation factor, putative | 908 | 7e-096 |
| A9PG62 Predicted protein | 884 | 4e-093 |
| B9RTH6 ADP-ribosylation factor, putative | 877 | 3e-092 |
| B9I4A4 Predicted protein | 863 | 1e-090 |
| C6T2I8 Putative uncharacterized protein | 848 | 6e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G22950.1 ATARFC1 (ADP-ribosylation factor C1); GTP binding | 909 | 3e-098 |
| AT1G10630.1 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F); GTP binding / copper ion binding / phospholipase activator/ protein binding | 525 | 1e-053 |
| AT2G47170.1 ARF1A1C; GTP binding / phospholipase activator/ protein binding | 524 | 1e-053 |
| AT3G62290.1 ATARFA1E (ADP-ribosylation factor A1E); GTP binding / phospholipase activator/ protein binding | 524 | 1e-053 |
| AT1G70490.1 ARFA1D; GTP binding / phospholipase activator/ protein binding | 523 | 2e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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