Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN50536

FASTA Sequence
Unigene ID: UN50536Length: 783 SSR 
GGCATCAACCATGATGATGATGATGAGTCAGATGATGATTTTTCTCAGCTCTCTCACAGGTCGAAAAGAGAGAGTGCACGAGGGAA
CTTCAACCCTATTCTCCCTCCACCACCACCACCAACAATGAGGCCAGTACATGTTGAGTCTGGTGCTGTGGACTTCCTCAGTGGGA
TGTCTACACACCTCAAGGAACCTCAAGTACTTCCCATTCATCAGATCGAGACTCTTCTGCTCCTGTTTTCGATAAGCCAGCTCCCA
GTAGCAAATCACCTGAGCAAGCTGTCTTCACCAAACCAGTCTATGACCACCAACAAACGGATCAGTTGCTGCCTCGTGCTCCCCCA
CCAATGTCTGTTAGAACCAACCAGAGGCAACAGCATAGTAATGTTCCTCAACGATCAAGCAGTGGCTCTGAGTCCTCTTACGATGA
TCTCTTGGGACAATCAAGGAATCTTTCTCTGAATCCAACCTCCTCAGCTGCTACACCACCACCGAAGAAAGATGACAAACCAGAGG
ATATCCTTTTCAAGGACTTGGTTGACTTTGCAAGAACCAGGAAGTCGTCGTCCTCTTCCTCCAAACCCAACAATTAGAACAACACA
CCCTTTTGAGACAGAGCTGCTGGTTGTTGCTTTAGTAATAACTAACTACTCATACAATTTTTTCTTAATTTGTGTCCTTGTTTTCT
TTTATTGAACATGGATGATTAAAAGCTTGAATATATAGAGATCTTATTTGTATAGATATGTCATAATGTATACAAAGATAACAGTT
TGATTAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564138 Target of Myb protein 1 [Arabidopsis thaliana]4974e-048
XP_002893160 VHS domain-containing protein [Arabidopsis lyrata subsp. lyrata]4965e-048
XP_002300956 predicted protein [Populus trichocarpa]2322e-017
AAC00635 Unknown protein [Arabidopsis thaliana]1929e-013
NP_177823 Target of Myb protein 1 [Arabidopsis thaliana]1929e-013

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LPL6 F24J8.3 protein4973e-048
B9GTY0 Predicted protein2321e-017
B9H7L0 Predicted protein2132e-015
O49283 F22K20.7 protein1926e-013
Q6NQK0 At1g769701926e-013

Arabidopsis top hits (Blast detail)Scoree value
AT1G21380.1 VHS domain-containing protein / GAT domain-containing protein4981e-050
AT1G76970.1 VHS domain-containing protein / GAT domain-containing protein1942e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  33%
 
92  67%

Unigene MembersMember information