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Information for unigene UN50557
| FASTA Sequence |
| Unigene ID: UN50557 | Length: 1100 |
SSR | | GGATCCAAACACTTCTCTCTCTGTTTCCTTCCTTCCTTCCTTCCTTCCGCAACCAAACACACAAAAGAACTCCCCTCTTCCCCAAC
AGAACCTCGCTGATCTCCGCCGGGAAGATTCAGTGAAACATAACCCACCGTCTTTTGAGATGGTGTCGCCCGAAAACGCTAATTGG
ATATCGGAATTGATCGATGCAGAAGAGTATGGGAGTTTCACAATCCAAGGTCCTGGCTTCTCCTGGCCTCTTCCCCAACCTATTCC
CCCCGTTTCCAGCCTTGGAGTTGATGGCTCAGCTGGTAATTCAGAAGCCACCAAAGAACCTGGCTCTAAAAAGAGGACGAGATGTG
AATCGTCCTCTGCAGCAACTAGCTCCAAAGCCTGTAGAGAGAAGCAGCGACGTGACAGGCTGAATGACAAGTTTATGGAGTTGGGT
GCAATTTTGGAACCAGGGAATCCTCCTAAAACAGACAAGGCTGCAATCCTGGTCGATGCTGTCCGCTTGGTTACACAACTTCGTGG
CGAGGCACAGAAGTTGAAGGACTCCAATTCAAGTCTTCAAGACAAAATCAAGGAGTTGAAGACGGAGAAGAACGAGCTGCGAGATG
AGAAGCAGAGGCTGAAGACATAGAAAGAGAATCTGGAGCAACAGCTGAAAGCCATGAATGCTCCTCAACCAAGCTTCTTCCCAGCC
CCACCTATGATGCCAACTGCTTTTGCTTTTGCGCAAGGCCAAGCTCCCGGAAACAAGATGGTGCCAGTCATCAGTTACCCAGGAGT
TGCCATGTGGCAGTTCATGCCCCCTGCTTCAGTCGATACTTTTCAGGATCACGTCCTTCGTCCACCAGTTGCTTAACTGGGAGTAA
CAAAGAAAACCCTCAAGAAAATCATCAACTGGTTTGCTTCTCGCTTCCTCTGAAAAAAAGAAAAGAAAAAGAAACGTCCATTTGTT
TTGCTCTCCTCTTTTTTAGTCCTATGGTTGCTTTGGTTTCATTGGTGTTATCCTCTTATAATAATTATCTTTTGAACAATGATATG
GCATTGTAAACTCCATTTACTTGGCGCAGTGTTATCTAGTCACATGTAAATTTTAAGTAGAGTTTGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200279 transcription factor ILR3 [Arabidopsis thaliana] | 1074 | 8e-115 |
| AAM64276 bHLH transcription factor, putative [Arabidopsis thaliana] | 1070 | 2e-114 |
| BAJ33812 unnamed protein product [Thellungiella halophila] | 1039 | 9e-111 |
| XP_002522828 DNA binding protein, putative [Ricinus communis] | 790 | 7e-082 |
| ACJ84233 unknown [Medicago truncatula] | 781 | 8e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FH37 Transcription factor ILR3 | 1074 | 4e-116 |
| Q9C682 Transcription factor bHLH115 | 642 | 4e-066 |
| Q8L467 Transcription factor bHLH104 | 409 | 5e-039 |
| Q9LTC7 Transcription factor bHLH34 | 383 | 5e-036 |
| Q9SN74 Transcription factor bHLH47 | 155 | 1e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SA09 DNA binding protein, putative | 790 | 5e-082 |
| B7FHK4 Putative uncharacterized protein | 781 | 5e-081 |
| C6TIB3 Putative uncharacterized protein | 763 | 7e-079 |
| C6TLH4 Putative uncharacterized protein | 759 | 2e-078 |
| B9I085 Predicted protein | 738 | 5e-076 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G54680.1 ILR3 (iaa-leucine resistant3); DNA binding / transcription factor | 1075 | 2e-117 |
| AT1G51070.1 basic helix-loop-helix (bHLH) family protein | 643 | 3e-067 |
| AT4G14410.1 basic helix-loop-helix (bHLH) family protein | 410 | 3e-040 |
| AT4G14410.2 basic helix-loop-helix (bHLH) family protein | 410 | 3e-040 |
| AT3G23210.1 basic helix-loop-helix (bHLH) family protein | 399 | 6e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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