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Information for unigene UN50580
| FASTA Sequence |
| Unigene ID: UN50580 | Length: 837 |
| SNP | GGAGTGTCACGAATCTTTCTCTCTCTCTTCTTCAATAGACACATAGCAATCATGGCTACCGAGGAGAAAGAGGTCCTCGCCGCCAA
ATTGGAAGAACAGAAGATCGATCTTGATAAGCCTGAAGTTGAGGACGACGATGACAACGATGAGGATGACTCAGACGACGATAAAG
ATGATGATGATGCGGAGGGGCAAGATGGAGAGGGAGGAGGAAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGCCGCAAAGCCATG
CTCAAGCTCGGTATGAAACCCATCACCGGTGTCAGCCGTGTCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCAAAACC
TGATGTCTTCAAGAGCCCAGCATCAGACACATACGTAATCTTCGGAGAGGCCAAGATCGAAGATCTGAGCTCTCAGATGCAGTCGC
AAGCTGCGGAGCAGTTCAAGGCGCCGGATCTCAGCAACGTGATCAAGGGCGAATCGTCGTCGTCCAGCGCTGCTGCGGTGGTGCAG
GATGACGATGGTGAGGAAGTCGACGAGGAAGGTGTTGAGCCAAAGGATATTGAGTTGGTGATGACACAAGCAGGTGTGCCCAGGCC
AAGGGCCGTGAAGGCTCTCAAGGCTGCTGATGGAGATATCGTCTCTGCCATCATGGAGCTTACCACCTAAAACCAAAAACCTTTTC
CAACTTTAGATGTGGTTTTAACTTGAGTTATATGTGTCCCAGAGATTTTCAAGTTTTTGTTTCTATCTTGAAGCGATTTTCAATGT
TGTATCAGTATTACAGTTTGGTTTGTTATTCAATTATCAAGCGTCAGTGGTGAGTTTCAGACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187845 Nascent polypeptide-associated complex subunit alpha-like protein 1 [Arabidopsis thaliana] | 874 | 8e-092 |
| NP_196889 Nascent polypeptide-associated complex subunit alpha-like protein 3 [Arabidopsis thaliana] | 865 | 9e-091 |
| XP_002871590 hypothetical protein ARALYDRAFT_909339 [Arabidopsis lyrata subsp. lyrata] | 865 | 9e-091 |
| NP_001136911 hypothetical protein LOC100217069 [Zea mays] | 725 | 2e-074 |
| XP_002445811 hypothetical protein SORBIDRAFT_07g026160 [Sorghum bicolor] | 705 | 3e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LHG9 Nascent polypeptide-associated complex subunit alpha-like protein 1 | 874 | 4e-093 |
| Q6ICZ8 Nascent polypeptide-associated complex subunit alpha-like protein 3 | 865 | 4e-092 |
| Q9M612 Nascent polypeptide-associated complex subunit alpha-like protein | 678 | 2e-070 |
| Q9SZY1 Nascent polypeptide-associated complex subunit alpha-like protein 4 | 623 | 5e-064 |
| Q94JX9 Nascent polypeptide-associated complex subunit alpha-like protein 2 | 622 | 6e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PA21 Putative uncharacterized protein | 726 | 8e-075 |
| B4FL79 Putative uncharacterized protein | 725 | 1e-074 |
| A9P8T1 Putative uncharacterized protein | 720 | 4e-074 |
| A2PYH3 Alpha chain of nascent polypeptide associated complex | 716 | 1e-073 |
| A9NLN5 Putative uncharacterized protein | 716 | 1e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12390.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 894 | 2e-096 |
| AT5G13850.1 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) | 871 | 8e-094 |
| AT4G10480.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 624 | 3e-065 |
| AT3G49470.1 NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) | 623 | 4e-065 |
| AT4G10480.2 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 619 | 1e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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