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Information for unigene UN50601

FASTA Sequence
Unigene ID: UN50601Length: 1009 SSR 
ATAACTGAGAGATATATAAAGCAGCAAAATAACAAAACTACCAATAGTTTGTCCAGAATCTTTCAACTTTAGACTGTGTTAACTAA
TAAAAAACGTAAAAGCATATGACCAAAAACAACAATTAGTGTAGACGAAAAGGACTAAAATAACCTCAAACATGCACATTAGTATT
TGTAGTATTGACATTAACAAGAAGAAAATTCATCCGACTTTTAACCTTTTCTTTCTTTTTCTTCTGGTTGTTTAAGTAACATCAAG
GTCTGGCTCTCTTGTTAGTGCAACTTGGGCACTTGTAGTGCTTGATGTGCTCTGCTTTTGCAGGTGTAATCTGGACACATTTTCCA
TGGAACCATTTCTGACACGCGTCACAGCATATCCAAAACTCATCTGTACCGTAGTTGTCTCCACAAGCGCCACAAACCGCACCTTG
TTCTTCCTCGTCTTCACTCTCATCTTCTTCTTTAGGCAATGGAGATGACATCTTCGAAACCTTCAAGCCGCTAGGTTTGCTTTTGC
TATTGTTGTTATTGGTACCAGAATGATCTTTGGATTGCTTTGCATTGCCCGTCACAACCTCGAAAATGGTTGGGAGATCGTTTATC
ATCTGGAAGAGTCTCTTCCTCTCATTCTTACCAAACCCGAAACGTGCACCAAAGTAGAAGGCAACAGAAAGCAGCCAGGAATCACT
GTGAACAGCGACCAAAGAGACCCAGTCCTTTTCTTGCATGCCGTCTCTAGCGAAATTGATGCCTAGAGCTGGTTCAGGAAGCTCAG
GAGGAACTTCCTCTGCGGGAAGATTAACCTCCCATGTCTCATTTGGAAGTCCATACAGAGACAAGTTCTCCTTCTCAGGATCGCAC
GTTTGGTGAAACTTCACCATATCTGCATACGAATAAACAAAATAAAACAAACACACAAGCTTATCCTTTTGATTCGACTGGGTCGG
AGAAAACAAAACAGGAAAGAACAGAAAAGAGAGAGAGAGAGGAGATGAAAGTTACCGATAGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001189502 protein alfin-like 6 [Arabidopsis thaliana]10424e-111
XP_002875129 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]10173e-108
NP_172903 protein alfin-like 7 [Arabidopsis thaliana]9393e-099
ABI97244 PHD5 [Glycine max]9367e-099
XP_002892811 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]9367e-099

Swiss-Prot top hits (Blast detail)Scoree value
O81488 PHD finger protein At5g262105538e-056
Q9W0T1 Nucleosome-remodeling factor subunit NURF3011569e-010
Q8C9B9 Death-inducer obliterator 11343e-007
Q9BTC0 Death-inducer obliterator 11272e-006
Q5RHD1 Lysine-specific demethylase 7A1228e-006

TrEMBL top hits (Blast detail)Scoree value
Q8LA16 At1g145109392e-099
Q06A75 PHD59365e-099
Q9M9R2 F14L17.29 protein9349e-099
Q4ZH50 Putative alfin-like transcription factor8918e-094
A0FK65 PHD58854e-093

Arabidopsis top hits (Blast detail)Scoree value
AT2G02470.1 AL6 (ALFIN-LIKE 6); DNA binding / methylated histone residue binding10232e-111
AT1G14510.1 AL7 (ALFIN-LIKE 7); DNA binding / methylated histone residue binding9391e-101
AT3G42790.1 AL3 (ALFIN-LIKE 3); DNA binding / methylated histone residue binding8135e-087
AT3G11200.1 AL2 (ALFIN-LIKE 2); DNA binding / methylated histone residue binding7241e-076
AT5G05610.1 AL1 (ALFIN-LIKE 1); DNA binding / methylated histone residue binding7241e-076

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  20%
 
102  40%
 
92  40%

Unigene MembersMember information