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Information for unigene UN50614

FASTA Sequence
Unigene ID: UN50614Length: 781 SSR 
GGGGTCGTCTTCTTGCAGAGAAAAAAAAAATTAAAAGAGCCTCGAAAAATTCACAGACTTGTCTCCCTCTCTCTTTCAGATTTTAG
TAGCTTCTGAAAAATTTCTCTAAAAGAAAAAAATGAGCAAGTTCTGGACTTTCCTCACTGCTCTTCACTCAGGCGCTGGCCCACTG
GTTATGTTGGTGTATCCATTGTACGCATCGGTTGTGGCAATGGAGAGCACAACGAAAGTAGACGACGAGCAGTGGCTTGCGTACTG
GATCATTTACTCCTTCCTCACCCTCACGGAGCTGATTCTGCAATCCCTTCTCGAGTGGATCCCGATTTGGTATTCTGTGAAACTGG
TGTTCGTGGCTTGGTTGGTCCTGCCTCAGTTCCATGGCGCAGCTTTCATCTACAACCGCGTGGTGAGAGAACAGTTCAAGAAACAC
GGCGTCTTCGGCTCCTCCTCCTCCTCTCACACCAAACACTCCAAGCACTCCAAACCCAACATCATCCACTCCATTTTCCACCGGGA
GGGACAAGAGGCTCACTCTCACTGACGCCAAAGCGGACGAGAAGCTCGAATAGCATTGTAATGGGAGTTGGTGGTGGCCCCTTCTT
GTCTTCATGTCTAATCTTACTTTTGCTTTAGTTTTTCATTTAATAATTTGAGAAATATGATAATGACTGAGGAGGTGTGTGATCGT
TTTAAATTAGAAATGGCTTCTTGTTGTTGCATTGCTTTGATTCCACGACGACGTATTTTCCATTTGGAACACAAGTGTTAACGCTA
TTGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34072 unnamed protein product [Thellungiella halophila]6372e-064
NP_567713 HVA22-like protein d [Arabidopsis thaliana]5942e-059
ACJ09256 HVA22d [Arabidopsis thaliana]5906e-059
ACJ09250 HVA22d [Arabidopsis thaliana]5871e-058
ACJ09230 HVA22d [Arabidopsis thaliana]5862e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q9S760 HVA22-like protein d5941e-060
Q9FED2 HVA22-like protein e4783e-047
Q07764 Protein HVA224012e-038
Q9S7V4 HVA22-like protein a2857e-025
Q682H0 HVA22-like protein f2776e-024

TrEMBL top hits (Blast detail)Scoree value
B6VAJ6 HVA22d5941e-059
B6VAM3 HVA22d5904e-059
B6VAL7 HVA22d5879e-059
B6VAJ7 HVA22d5861e-058
Q0IGM2 At5g507204784e-046

Arabidopsis top hits (Blast detail)Scoree value
AT4G24960.1 ATHVA22D5992e-062
AT5G50720.1 ATHVA22E4783e-048
AT4G24960.2 ATHVA22D4496e-045
AT1G74520.1 ATHVA22A2856e-026
AT2G42820.1 HVA22F (HVA22-LIKE PROTEIN F)2775e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

Unigene MembersMember information