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Information for unigene UN50675

FASTA Sequence
Unigene ID: UN50675Length: 767 SSR 
AAATAGATTTAGAGATTCACTTCCAGATAAAGAAAGATAATCTGGTGATTCACAAAACATTTTCTACATCTTGATACACATAACAT
AATTGTTACTGTTGTCTCTCTCTACTTATTTGGGTCGTCTAGAGAGAGGAAAAGAGACCCTTTGAGGAGTTTGGCTTGGAAGCTCA
GATGTTTGTTGTTCTTGAGATGATGATTGTGCAGGATCCGTCATTTCTTCGTCGTCCTCTGTTTCTTCAGGTTCTGTCGAAGCTGT
CTTCTTCGGTATCACGAGCTGGTAGTTTGGGCTAAGCAATGTGTCATGTTCAGGCGGGAGAGGAATGCCTGGTCCTGCTATCGATT
TAGGCAAAGGAATCTTGTTCCTGCTCGCAGCGAGCTCTAGCAGTACCTCTCTTGGAGGAGGCTGCGAGAAGCCGAAACTAACTTTG
GATTGAATAGCTAGCTTCACATCGTCACAGTCAATGGTGGATTTGGTAGCATGCTCCGAGTAAACCTGAGCATCGGTCAACACTTC
GACCACGTAACGGTACCATAACTCGAGAAACTGGTGCACCACGCGAGGCTCGTAGTCCTCCACGCCCATCGATTTGAGCAGAGACT
TCACAATCTTGGCGTCTCTTGGCAGATCTTCTTCACCTTCTCCCGCCATTTGTTTTTTTCGCCTAAGACTAGCGAAAGTCGGTGGA
GGGCGGCGACAGATGCACGACGGAGATTAAAGAACGTCGGCCAGTTAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175816 transcription initiation factor TFIID subunit D7 [Arabidopsis thaliana]8479e-089
XP_002894479 TAFII21 [Arabidopsis lyrata subsp. lyrata]8433e-088
XP_002891803 hypothetical protein ARALYDRAFT_474557 [Arabidopsis lyrata subsp. lyrata]8272e-086
XP_002299587 predicted protein [Populus trichocarpa]7152e-073
XP_002521322 protein with unknown function [Ricinus communis]7062e-072

Swiss-Prot top hits (Blast detail)Scoree value
Q16594 Transcription initiation factor TFIID subunit 93313e-030
Q62880 Transcription initiation factor TFIID subunit 9B3261e-029
Q5BKE0 Transcription initiation factor TFIID subunit 93261e-029
Q17QQ4 Transcription initiation factor TFIID subunit 93242e-029
Q8VI33 Transcription initiation factor TFIID subunit 93232e-029

TrEMBL top hits (Blast detail)Scoree value
Q9SYH2 At1g541408476e-089
A9PCE8 Predicted protein7151e-073
B9S5Q3 Putative uncharacterized protein7061e-072
Q38M73 Putative uncharacterized protein6631e-067
C6SYR1 Putative uncharacterized protein6282e-063

Arabidopsis top hits (Blast detail)Scoree value
AT1G54140.1 TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT); DNA binding / transcription initiation factor8483e-091

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

Unigene MembersMember information