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Information for unigene UN50702
| FASTA Sequence |
| Unigene ID: UN50702 | Length: 784 |
SSR | | GGACGGGAGGGAGGACAAGCTTAAAAGCTCCAGAGAGATTTTCCCCAGATTTTCAACTTTCTACGTGAGTGACGATGGCGCTTCGT
GCTACTACTCAAGCGACTGCTCGCATCGCGGCGAATCTCGGACGTGTAGGTCGGACTTTCTCAAGTGACGCGGTGGTGGAGTCAGA
TTACAAGAGGGGCGAGATCGGTAAAGTCTCCGGAATTCCAGAGGAGCATCTTGCACGAAAGGTGATAATATACTCACCAGCGAGAA
CAGCGACACAGCAAGGATCTGGAAAACTTGGGAAATGGAAGATCAATTTCGTCTCCACCCTCAAGTGGGAGAATCCATTGATGGGC
TGGACTTCTACAGGTGACCCTTATGCCAATGTTGGTGACTCCGCTCTTGGTTTTGATTCCGAGGAAGCTGCTAAGTCTTTTGCTCA
GCGTCATGGCTGGGATTATGTGGTCAAGGAGCCCAAAACACCGTTGTTGAAGGCTAAGTCTTACTCTGACAACTTCAAGTGGAAAG
GCAAGCCTCAACCACAGAACTGATCACTACATCATCTTCGTCCATCTCTCGACCAAAAGGAGACACTTCGCTTTGAAGGCTCTCAT
TTTTATTCGTTATTTTAGCATCTGTGAGCTTTTTCACTGAACTATATCCATGGTTGGATTTTACTTTTTTTTTTTTCTATTTTCCC
TTATTACTACTACACAATAATATGATGATGATGATGATGACAAACACACCTCCTTGGGTATTTCATCAAGCTTTTATGGTTAATTT
TATTTGATCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABK78688 NADH-ubiquinone oxidoreductase related-like protein [Brassica rapa] | 736 | 7e-076 |
| XP_002866696 hypothetical protein ARALYDRAFT_358798 [Arabidopsis lyrata subsp. lyrata] | 731 | 3e-075 |
| AAM63888 unknown [Arabidopsis thaliana] | 725 | 1e-074 |
| NP_201560 NADH dehydrogenase (ubiquinone) Fe-S protein 4 [Arabidopsis thaliana] | 717 | 1e-073 |
| XP_002525280 NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial precursor, putative [Ricinus communis] | 558 | 3e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0MQH0 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial | 276 | 7e-024 |
| O43181 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial | 276 | 7e-024 |
| P0CB95 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial | 274 | 1e-023 |
| P0CB96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial | 274 | 1e-023 |
| Q02375 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial | 272 | 2e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0T2P1 NADH-ubiquinone oxidoreductase related-like protein | 736 | 5e-076 |
| Q8LC28 Putative uncharacterized protein | 725 | 9e-075 |
| Q9FJW4 At5g67590 | 717 | 8e-074 |
| B9SH11 NADH-ubiquinone oxidoreductase 18 kDa subunit, mitochondrial, putative | 558 | 2e-055 |
| A9PDQ9 Predicted protein | 554 | 6e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G67590.1 FRO1 (FROSTBITE1); NADH dehydrogenase (ubiquinone) | 718 | 4e-076 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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