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Information for unigene UN50708

FASTA Sequence
Unigene ID: UN50708Length: 778 SSR 
GGATCAACCATCAACACAAAATAAACACGTAGAAGCTTTAAAAAAGAGAGAGCGAGAGAGAGAGAAATGGCGACGTCAGGAACATA
CGTGACGGAGGTTCCGTTGAAAGGAACAGCGGAGAAACACTACAAGAGGTGGAAGAGCGAGAACCATGTCTTCCCTGACGCCATCG
GCCACCACATCCAAAATGTCACCGTTCACGAGGGCGAGCATGACTCCCATGGTTCTATCAGGAGCTGGAACTACACATGGGATGGA
AAGGAAGAGATATTCAAGGAGAAGAGAGAGGTAGACGATGAGAACTTAACGTTGACGTTACGAGGACTTGAGGGTCATGTGATGGA
GCAGCTCAAGGTGTATGATGTGATCTACCAATTTATCCCCAAAACTGAGGATACCTGTGCCTGCAAAATCACTCTTGTATGGGAGA
AGCGCAACGATGATTCTCCTGAACCAAGCACCTACATGAAATTCGTCAAGAGCTTAGTCGCCGACATGGACCACCACGTCAGTAAA
GCTTAATCATTTATATCACCACCATCATGATCATGATAACATTATCATGATCATCATTATCACCATCCACCTCGCCATCACCATCA
CCATCATCACTCTCTCGATTTACTTATTAGGGTATTTTCAATATAATAAATGCGTCTTGTATGTGGAGTTTTATTTCTATGTAATT
GTTTGGTCTTGTAAGATGGTTTGATATGTTGTTTTAGACCTATGGTCAATTGGTCATCATCGAGTTCGATGTAATGATTGCTAAGA
TATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867694 hypothetical protein ARALYDRAFT_492500 [Arabidopsis lyrata subsp. lyrata]7492e-077
NP_194099 SRPBCC ligand-binding domain-containing protein [Arabidopsis thaliana]7465e-077
ACC91258 major latex-related protein [Capsella rubella]7456e-077
NP_194098 SRPBCC ligand-binding domain-containing protein [Arabidopsis thaliana]6929e-071
XP_002867695 hypothetical protein ARALYDRAFT_914230 [Arabidopsis lyrata subsp. lyrata]6766e-069

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZVF3 MLP-like protein 3286656e-069
Q9ZVF2 MLP-like protein 3296477e-067

TrEMBL top hits (Blast detail)Scoree value
Q9SUQ9 AT4g23680/F9D16_1507463e-077
B2WS86 Major latex-related protein7454e-077
Q9SUR0 AT4G23670 protein6926e-071
B2WS87 Major latex-related protein6523e-066
C0SV41 Putative uncharacterized protein At2g01530 (Fragment)6471e-065

Arabidopsis top hits (Blast detail)Scoree value
AT4G23680.1 major latex protein-related / MLP-related7472e-079
AT4G23670.1 major latex protein-related / MLP-related6933e-073
AT2G01520.1 MLP328 (MLP-LIKE PROTEIN 328); copper ion binding6664e-070
AT2G01530.1 MLP329 (MLP-LIKE PROTEIN 329); copper ion binding6485e-068
AT1G14950.1 major latex protein-related / MLP-related6404e-067

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  25%
 
71  25%
 
82  50%

Unigene MembersMember information