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Information for unigene UN50711

FASTA Sequence
Unigene ID: UN50711Length: 851 SSR 
ATTCGTCTCTTACAAATCATCAAGTATACATTTGATCTTTTCTTATTCTCATCAGCAGAGCAAACAAAACTTTTTTCGATAACTAT
GGCAGAGGAAACCAAGAACATTGAGGTGCCAAAGGTAGAGTCGGAGGAATCATCAGCAGGGGCCACAGAGGTTACAGATCGTGGAC
TGTTCGATTTCTTGGGGAAGAAGAAAGATGAAACAAAACCAGAGGAGACCGCCATAGCGTCTGAGTTTGAGCAAAAGGTTCACGTC
TCGGAGCCGGCGCCTGAGGTTAAACACGAGGAAGAGGAAGAAGAGAAGAAGCATCATAGTCTCCTCGAGAAGCTTCACCGCAGCGA
CAGCTCTTCAAGCTCCTCAAGCGAGGAAGAAGGCGAAGATGGTGTGAAGAGGAAGAAGAAGAAGGACAAGAAGAAGGTAACTACTG
AAGGAGGAGAGGTGAAGACAGAGGAGGAGGAGAAGAAAGGGTTTATGGATAAGCTGAAGGAGAAGCTTCCTGGACACGGAAAGAAG
CCTGAAGATGCTCCACCGGCACCGGTTGTTGCTCCTCCGGTGGAGGAAGCGCATCCGGCGTAGAAGAAGGGGATCTTGGAGAAGAT
TAAGGAGAAGCTTCCAGGCTACCATCCCAAGACTGTAGAGGAGGAAAAGAAGGATAAGGATGATCATTAAAGATATGAATCATGAT
GATGATGATGATGTGTTATTGTGTTGAGTGTTGATCATCTTTTGCTTTTGTGTTGTTGGAAGTTTGTTGGCTTTTTATTATTTCCT
TTGTTGATTTCAGCTTTCCTTTGTTATGTGTTGTATATGATGATTTCAAAGGTGTTTTAATGGTATGATTATTTTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA64428 pollen coat protein [Brassica oleracea]8335e-087
ABV89609 pollen coat protein [Brassica rapa]8282e-086
ABD95987 dehydrin [Brassica juncea]7403e-076
ABV56004 dehydrin protein [Capsella bursa-pastoris]5612e-055
XP_002285919 PREDICTED: hypothetical protein [Vitis vinifera]4822e-046

Swiss-Prot top hits (Blast detail)Scoree value
P42763 Dehydrin ERD144641e-045
Q9XJ56 Phosphoprotein ECPP444497e-044
P31168 Dehydrin COR474381e-042
P42759 Dehydrin ERD104246e-041
P46524 Dehydrin COR4102132e-016

TrEMBL top hits (Blast detail)Scoree value
Q39386 Pollen coat protein8333e-087
A8IXD7 Pollen coat protein8281e-086
A9X5B5 Dehydrin7402e-076
C6EQ93 Dehydrin protein5611e-055
Q76MG1 Dehydrin (Fragment)4086e-038

Arabidopsis top hits (Blast detail)Scoree value
AT1G76180.1 ERD14 (EARLY RESPONSE TO DEHYDRATION 14); calcium ion binding4641e-046
AT1G20440.1 COR47 (COLD-REGULATED 47)4381e-043
AT1G20450.1 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding4245e-042
AT1G20450.2 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding3969e-039
AT4G38410.1 dehydrin, putative1933e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  100%

Unigene MembersMember information