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Information for unigene UN50717
| FASTA Sequence |
| Unigene ID: UN50717 | Length: 867 |
SSR | | GACTTATTATTCAGCAGGGAACTTAACGTTTATAAAGTTAACAAGAGCGACCAAGAACTTATCAAGATAGAGTACTTAAATTGTTT
TACATCCAAACAGCCATTGGTCCATTACAGAACCTAATCAAAGGACAACCGTAGTACGGATACGACAGATCGGTAGGACCCCTTAT
AGTATTTTTTTGTAATAACTATTTTGTTTTTTATTTTTTTCCACCAAGAGAGAAAGAGAGAGAGGGAAAAATTAAAATCAGTCACA
TGGAGAAGAAACGAAAATACGGATATGATCCAAGAAGCTAAGATGCTGCGGCCTATCGTTCCGCTTCACGTACCCACGCGCTTCCT
TCTCCGTGTACGCGCCGAACGATCTCCTCCTATTCCTCTCCCACAGCTCCTCCTCGTAGCTCTTGTGCGCGTAGTACGCCTCCACC
ACGCACGACAAAGCATGTTCTGTTTCAAGATCATCTCCTCCTCCTTCCTCCTTCAGGAGACGGATCGGTTGTCTGACGTAATGGCC
ACGGCTCGTCCCTTCGAGCTCGTCGAGGCGGGAGAGACCGCGAGGAGAAACCGCGTAGAGCTCTCCCGTGACGCGCTGGCCCGATC
CGGGCTTGTTGAGGAGGAAAGGGACTCGGTAGGGCCCGCAGACGAGGGGGTACATGTCTAAGGTTTGGTAGACTCCTTTGAAAGAT
GCGTCTCCGGATCGGATCAGATCTTGCATCAGGACGTGGTTCGAGAATCCTCTCTTCAAAGTTCCGTATGAGAACACAAGCGTCGT
CGTTTTGGCGGTGATGGTGGTCTCCGTGGCGTTTGATTCGTGGCCCATGGTTGAGAGAAATAGAATCAAGAATCGTATTAAGAGAG
AGAGAGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM63759 unknown [Arabidopsis thaliana] | 820 | 2e-085 |
| NP_566187 AIG2-like (avirulence induced gene) family protein [Arabidopsis thaliana] | 814 | 8e-085 |
| AAF26968 unknown protein [Arabidopsis thaliana] | 809 | 3e-084 |
| XP_002882260 UPF0131 protein At3g02910 [Arabidopsis lyrata subsp. lyrata] | 794 | 2e-082 |
| XP_002325443 predicted protein [Populus trichocarpa] | 574 | 5e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M8T3 Putative gamma-glutamylcyclotransferase At3g02910 | 809 | 1e-085 |
| Q9BVM4 AIG2-like domain-containing protein 1 | 181 | 9e-013 |
| Q66I06 AIG2-like domain-containing protein 1-A | 168 | 3e-011 |
| Q923B0 AIG2-like domain-containing protein 1 | 164 | 8e-011 |
| Q66KX0 AIG2-like domain-containing protein 1 | 164 | 8e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LCA5 Putative uncharacterized protein | 820 | 1e-085 |
| Q8VZJ3 AT3g02910/F13E7_14 | 814 | 5e-085 |
| B9IPV7 Predicted protein | 584 | 3e-058 |
| B9S256 Putative uncharacterized protein | 554 | 8e-055 |
| C0PD93 Putative uncharacterized protein | 457 | 1e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02910.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46720.1); Has 210 Blast hits to 210 proteins in 66 species: Archae - 2; Bacteria - 27; Metazoa - 122; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | 815 | 2e-087 |
| AT5G46720.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02910.1); Has 249 Blast hits to 249 proteins in 85 species: Archae - 5; Bacteria - 65; Metazoa - 121; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | 384 | 2e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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