Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN50720

FASTA Sequence
Unigene ID: UN50720Length: 553 SSR 
GGAACCAATCAGACAAAAGCATAACATCTCTTTATTGGGATCTCAACTTTCATATTTTCTCTGACAAGGCACGACTCCAGAATGGA
ACGAGACATTTATCTTCAATGTCTCTGAAGGAACAACAGAGCTAAAAGCCAAAATCTTTGACAAAGATGTTGGCACAGAGGATGAT
CATGTTGGTGAAGCAACCCTTCCATTGGAGGCGGTTTTCTTGGAAGGAGAGATCCCACCAAGTGCATACAATGTGGTGAAAGATGG
AGAGTTCAAAGGCGAGATTTGGATCGCACTCTCCTTCAAACCTTCGGAAAATCGAAGCAGGGGTTTTGAAGAGGAGTCTTATGGAG
GCTGGAAAAATTCTGAAGCTTCTTACTAATTAAAGAGATCAAAAACACCAAATGTGTGTGTTTACTGTTTTCGTTCGAGTCTTGAC
AATAAACTGTTGAAGTTTCCTTTTGAAAGGGTCTTTTGTTCAGAGAGTTTCTTTGTCTTGTTATGTTTATTATTATTATTATTCTT
GTGTTCTGTTTGGATTTAATGATTTAAAAACTCCAGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176511 calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana]4845e-047
NP_001077765 calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana]4845e-047
XP_002887967 C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]4837e-047
AAM63058 putative elicitor-responsive gene [Arabidopsis thaliana]4773e-046
1WFJ Chain A, C2 Domain-Containing Protein From Putative Elicitor- Responsive Gene3725e-034

Swiss-Prot top hits (Blast detail)Scoree value
Q9C8S6 C2 domain-containing protein At1g632204843e-048
Q25AG5 Elicitor-responsive protein 33177e-029
Q0JBH9 Elicitor-responsive protein 33177e-029

TrEMBL top hits (Blast detail)Scoree value
A8MRD0 Uncharacterized protein At1g63220.24844e-047
A9PD47 Putative uncharacterized protein3232e-028
B9GPX0 Predicted protein (Fragment)3232e-028
D3JCC7 Elicitor responsive gene 33213e-028
B7E8T2 cDNA clone:001-118-A01, full insert sequence3179e-028

Arabidopsis top hits (Blast detail)Scoree value
AT1G63220.1 C2 domain-containing protein4852e-049
AT1G63220.2 C2 domain-containing protein4852e-049
AT3G55470.1 C2 domain-containing protein1384e-009
AT3G55470.2 C2 domain-containing protein1384e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information