 |
Information for unigene UN50726
| FASTA Sequence |
| Unigene ID: UN50726 | Length: 757 |
SSR | | TCCGATCTCAATCTCGCTGTACAGAAAAAACCAAAGAGAGAAATCACGACCCGGCATCTGACCCGAAAACCCGGAAGACACACGAA
AAAACCATGGGCAAGGACGGATTGAGCGACGACCAGGTCTCCTCAATGAAGGAGGCCTTCATGCTCTTCGACACAGACGGCGACGG
AAAAATCGCGCCGTCGGAGCTCGGGATCCTGATGCGATCCCTCGGCGGGAACCCGACCCAGGCCCAGCTGAAATCCATCGCCGCAT
CCGAGAGCCTCACGTCTCCGTTCGATTTCGACAGGTTCCTCGATCTGATGGCGAAGCACCTGAAGACGGAGCCGTTCGATCGCCAG
CTACGAGATGCTTTCAAGGTGCTCGACAAGGAGGGGAGTGGATTCGTGGCGGTTGCGGATCTGAGGCATATCTTGACGAGTATTGG
TGAGAAGCTGGAGGCTAGTGAGTTTGATGAGTGGATCAAGGAGGTGGATGTTGGATCCGATGGGAAGATCCGGTATGAGGATTTCA
TTGCCAGGATGGTTGCTAAGTGAAAGATCTTTTGAAATGTTACTAACTTTATTATTGTTGTTTCTTGTTTGTTTCGTTTTGTTATG
GAGATGTTGTGTGGTGGTGGTGGTGATTCGTTGAAGTTTTTAATCTCTTATGCATTTGTAGTTCGTTGGTTTTTGGATACAATGAA
TGTAATTGAGTCCAAATATGTGTTGCTTTTTTTTTTGGCCCCTTTTAATCTCGAAATGTGTCTGATGAG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172695 putative calcium-binding protein CML13 [Arabidopsis thaliana] | 719 | 6e-074 |
| AAF79658 F5O11.4 [Arabidopsis thaliana] | 714 | 2e-073 |
| NP_176470 putative calcium-binding protein CML14 [Arabidopsis thaliana] | 695 | 4e-071 |
| AAF19542 F23N19.18 [Arabidopsis thaliana] | 694 | 5e-071 |
| XP_002886451 predicted protein [Arabidopsis lyrata subsp. lyrata] | 688 | 2e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94AZ4 Probable calcium-binding protein CML13 | 719 | 3e-075 |
| Q8VZ50 Probable calcium-binding protein CML14 | 695 | 2e-072 |
| Q84VG0 Probable calcium-binding protein CML7 | 584 | 1e-059 |
| P25069 Calmodulin-2/3/5 | 375 | 2e-035 |
| Q95NI4 Calmodulin | 374 | 3e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GVS4 Predicted protein | 658 | 5e-067 |
| A9P988 Predicted protein | 656 | 9e-067 |
| Q84U32 Putative serine/threonine kinase | 646 | 1e-065 |
| Q6L4B1 EF hand family protein | 643 | 3e-065 |
| B7FNA2 Putative uncharacterized protein | 642 | 4e-065 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12310.1 calmodulin, putative | 720 | 2e-076 |
| AT1G62820.1 calmodulin, putative | 696 | 1e-073 |
| AT2G41110.1 CAM2 (CALMODULIN 2); calcium ion binding / protein binding | 376 | 2e-036 |
| AT2G27030.1 CAM5 (CALMODULIN 5); calcium ion binding | 376 | 2e-036 |
| AT3G56800.1 CAM3 (CALMODULIN 3); calcium ion binding | 376 | 2e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
