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Information for unigene UN50729
| FASTA Sequence |
| Unigene ID: UN50729 | Length: 506 |
SSR | | GGATCCTCCTCTACTCAAAAGAGACATTCACGGCGATGGCGTCGCTTCTACTCGGAGCTCCTCCGCGAGTCATCACCGTCCCATCA
TCTCCGAGGCTATCATCATCTCACTCGGAAACTCTCGGCGTCTCTCTCTCTCGCTTCACTCAGCAACTGTCTCTCTCCGCCTCGCC
ATCATCCAGCTCAGTTCCACTTGTGTACTGTGGCCGAGGTGACCGCAAAACCGCGAGAGGAAAGCGCTTTAATCACTCTTTCGGGA
ATGCGAGGCCACGGAACAAGAATAAAGGAAGAGGGCCACAGAGAGTTCCTGTCCCTCCTGCTCCACCGAGGAAGGATAAGTTTGAG
AATGACGAGAAGATCAAAATCGACATCGACGAGTCTCTCTTCTCCAATTAGAGTCTTTCTTCACTTCCTGTTACTGTAATTCTATT
CGAACAGATGCTGCAACTTGTTAAACATCTCCAATTTCTCATCTTTCTATGAAAAGAAATCTGCTTTCTTGTTTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181349 30S ribosomal protein S31 [Arabidopsis thaliana] | 515 | 1e-050 |
| XP_002879729 plastid-specific ribosomal protein 4 [Arabidopsis lyrata subsp. lyrata] | 497 | 1e-048 |
| XP_002274396 PREDICTED: hypothetical protein [Vitis vinifera] | 375 | 2e-034 |
| CAN83819 hypothetical protein VITISV_030951 [Vitis vinifera] | 373 | 3e-034 |
| CBI30407 unnamed protein product [Vitis vinifera] | 370 | 6e-034 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O80439 30S ribosomal protein S31, chloroplastic | 515 | 6e-052 |
| P47910 30S ribosomal protein S31, chloroplastic | 256 | 6e-022 |
| P47909 30S ribosomal protein S31, mitochondrial | 127 | 6e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5C1F7 Putative uncharacterized protein | 373 | 2e-034 |
| B9SZC7 Structural constituent of ribosome, putative | 341 | 1e-030 |
| B9IG72 Predicted protein | 304 | 2e-026 |
| C5XFH5 Putative uncharacterized protein Sb03g043130 | 275 | 5e-023 |
| B4FP06 Putative uncharacterized protein | 267 | 4e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G38140.1 PSRP4 (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4); structural constituent of ribosome | 516 | 5e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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