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Information for unigene UN50768
| FASTA Sequence |
| Unigene ID: UN50768 | Length: 1392 |
SSR | | CTGCTGCTTACATTATACACATCTTCTCTCTCTCTCTCTGGTAGCCATGGCTTCGGCTACTTTCTCTGTGGCCAAACCATCTCTTC
AGGGTTTCTCTGACTTCTCAGGACTCAGAAACTCCTCTGCTCTTCCCTTGGGCAAGAAAACTTCTTCTGATGAGTTTGTTTCCTTC
GTCAGTTTCCAGACTTCTGCAATGGGAAGCAATGGAGGATACAAGAAAGGAGTGACCGAGGCCAAGCTAAAGGTAGCCATCAATGG
ATTCGGTAGGATCGGCAGGAACTTCTTGAGATGTTGGCATGGTCGCAAGGACTCTCCTCTTGATGTCATTGCCATTAACGACACTG
GTGGTGTCAAACAAGCAACGCATCTCCTCAAATACGACTCGACTCTTGGAATCTTCGACGCTGACGTCAAGCCTTCAGGAGACTCT
GCTCTCTCTGTCGATGGAAAGATCATCAAGATTGTCTCTGATCGCAACCCATCCAACCTCCCCTGGGGGGAACTAGGCATTGACTT
GGTCATAGAAGGAACCGGAGTGTTTGTAGACAGAGAAGGTGCTGGTAAGCACATTCAAGCTGGAGCCACGAAGGTTCTCATCACTG
CACCTGGTAAAGGTGATATTCCAACTTATGTGGTTGGTGTCAATGCTGAACTTTACAGCCATGAAGACACAATCATCAGCAATGCT
TCTTGTACTACCAACTGTCTCGCTCCATTCGTCAAGGTTCTTGACCAGAAGTTCGGTATCATAAAGGGTACAATGACAACCACACA
CTCCTACACTGGTGACCAGAGGCTGTTGGATGCTAGCCACCGTGATCTAAGGAGAGCAAGAGCAGCTGCTTTGAACATCGTTCCAA
CATCTACAGGAGCAGCTAAAGCCGTGGCGCTAGTGCTCCCTAACCTGAAAGGAAAACTCAACGGAATCGCGCTGCGTGTGCCAACT
CCTAACGTCTCGGTGGTCGACTTAGTCGTGCAGGTCTCGAAGAAGACTTTCGCTGAGGAAGTCAACGCTGCCTTCAGGGATGCGGC
TGAGAAAGAGCTTAAAGGTATACTCGATGTTTGCGACGAGCCTCTTGTCTCTGTTGACTTCAGGTGCTCTGACGTGTCGTCCACCA
TTGATTCTTCTCTGACCATGGTTATGGGAGATGATATGGTTAAAGTGATTGCTTGGTATGATAACGAATGGGGTTACTCGCAGAGA
GTCGTTGATTTGGCTGACATTGTTGCCAATAACTGGAAGTGAAGAAGTCTCAACTGTTTGATGTTGTTCTGCTCCATTTTTTATTC
TACTGTTATTATTATGATTCGGAATGTATAATTGTAGTTCCTGAGTTTATATGTATTTGTGCTCTTCAATTCTAATAGTAATAAAC
TTTATATTCGAACATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ10475 glyceraldehyde-3-phosphate dehydrogenase [Brassica rapa subsp. chinensis] | 1995 | 2e-221 |
| XP_002892719 GAPA-2 [Arabidopsis lyrata subsp. lyrata] | 1991 | 5e-221 |
| NP_172750 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [Arabidopsis thaliana] | 1983 | 5e-220 |
| BAJ34149 unnamed protein product [Thellungiella halophila] | 1889 | 4e-209 |
| NP_566796 glyceraldehyde-3-phosphate dehydrogenase A [Arabidopsis thaliana] | 1846 | 4e-204 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P25856 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 1846 | 1e-205 |
| P12858 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 1770 | 1e-196 |
| P19866 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 1748 | 3e-194 |
| P09315 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 1734 | 1e-192 |
| P09043 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) | 1704 | 4e-189 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LPW0 At1g12900 | 1983 | 3e-220 |
| B9RGT1 Glyceraldehyde 3-phosphate dehydrogenase, putative | 1811 | 3e-200 |
| A5BCS8 Putative uncharacterized protein | 1791 | 6e-198 |
| A9PI59 Putative uncharacterized protein | 1787 | 2e-197 |
| B9IA33 Predicted protein | 1782 | 6e-197 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G12900.1 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 1984 | 1e-222 |
| AT3G26650.1 GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase/ protein binding | 1847 | 1e-206 |
| AT1G12900.3 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 1768 | 1e-197 |
| AT1G42970.1 GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase (NADP+)/ glyceraldehyde-3-phosphate dehydrogenase | 1416 | 9e-157 |
| AT1G12900.2 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 1251 | 1e-137 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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