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Information for unigene UN50789
| FASTA Sequence |
| Unigene ID: UN50789 | Length: 795 |
SSR | | GGGTTTCGTTGGAAGAAGATAAGAGGAAGATGCCAGGCCCTGTTGTTGAAGAAGTAAAGATTGAGGAATCCATCAAAGAGCAAATG
AAGCTCGAGAAGGAAGATGATGTTGTCGTTGAGGATGTCAAAGACGGAGATGAAGACGACGATGTGGATGACGATGACGATGACAA
CGTCGATGGAGGTGGTGACGATGAGAGCTCTAAACAAAGCAGAAGCGAGAAGAAAAGCCGCAAAGCTATGCTGAAGCTTGGAATGA
AACCTGTTACAGATGTTAGCAGAGTGACTATCAAGAGATCAAAGAATGTTTTGTTTGTCATCTCGAAGCCGGATGTGTTCAAGAGT
CCCAACTCTGAGACCTATGTGATATTCGGTGAGGCCAAGATTGATGATATGAGCTCTCAGCTACAAGCTCAAGCTGCTCAGAGGTT
CAAGATGCCGGACGTTGCTTCTATGATCCCTAACGCCGATGCTTCTGAAGCAGCAGCCGCGGTTGCTGCACAATAGGAGGACGAAG
ATGATGATGATGATGTTGATGAGACCGGTGTTGAAGCCAAGGATGTTGAGCTCGTGATGACCCAGGCTGGTGTTTCCAAGGCCAAA
GCCACTAAGGCTCTTAAAGCCAATGATGGAGATATCGTTTCCGCCATCATGGAACTCACTACGTAGGTTGAGTTGCAGAGTCTCGC
AATTGTCTGTTTTTCTTAATGAATGTCTCGTTTCTCGAACATTGTTTGTGTTTCGCCACTTTAAAAGCTATTATTTCTCTTCTATA
AAACATAACAAACTTGATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874632 hypothetical protein ARALYDRAFT_489891 [Arabidopsis lyrata subsp. lyrata] | 853 | 2e-089 |
| NP_192786 Nascent polypeptide-associated complex subunit alpha-like protein 4 [Arabidopsis thaliana] | 842 | 4e-088 |
| NP_001078369 Nascent polypeptide-associated complex subunit alpha-like protein 4 [Arabidopsis thaliana] | 833 | 4e-087 |
| NP_564415 Nascent polypeptide-associated complex subunit alpha-like protein 5 [Arabidopsis thaliana] | 789 | 5e-082 |
| AAM60929 putative alpha NAC [Arabidopsis thaliana] | 788 | 7e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZY1 Nascent polypeptide-associated complex subunit alpha-like protein 4 | 842 | 2e-089 |
| Q8LGC6 Nascent polypeptide-associated complex subunit alpha-like protein 5 | 789 | 2e-083 |
| Q94JX9 Nascent polypeptide-associated complex subunit alpha-like protein 2 | 626 | 2e-064 |
| Q6ICZ8 Nascent polypeptide-associated complex subunit alpha-like protein 3 | 605 | 5e-062 |
| Q9LHG9 Nascent polypeptide-associated complex subunit alpha-like protein 1 | 450 | 5e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WWN5 Putative alpha NAC | 842 | 3e-088 |
| A8MQP6 Uncharacterized protein At4g10480.2 | 833 | 3e-087 |
| B9IDG2 Predicted protein | 660 | 3e-067 |
| B9S5M4 Nascent polypeptide associated complex alpha subunit, putative | 655 | 1e-066 |
| A9PB21 Putative uncharacterized protein | 650 | 5e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G10480.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 862 | 8e-093 |
| AT4G10480.2 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 853 | 9e-092 |
| AT1G33040.1 NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5) | 809 | 1e-086 |
| AT3G49470.1 NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) | 646 | 9e-068 |
| AT5G13850.1 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) | 620 | 9e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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