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Information for unigene UN50824

FASTA Sequence
Unigene ID: UN50824Length: 1493 SSR 
TGGAATCTATGGGGCACGAAAACGCCGCCGTTTCAGAGAGCCATCACGACGAAGCTGCGTCGCAGGGATTCAAACTCGTCGGATTC
TCCAAGTTCGTGAGGAAGAATCCAAAGTCCGACAAGTTCAAGGTAAAGCGCTTCCACCACATCGAGTTCTGGTGCGGCGACGCCAC
CAACGTCGCCCGCCGCTTCTCCTGGGGACTCGGTATGCGACTCTCCGCCAAATCAGATCTCTCGACCGGAAACATGGTTCACGCCT
CCTACCTCCTCACCTCCGGCGACCTCCGATTCCTCTTCACCGCTCCTTACTCTCCGTCTCTCTCCGCCGGCGAAAACGCTACAGCC
TCCATCCCGTCCTTCGATCACGTTTCTTGCCGCTCCTTCTTCTCTTCGCATGGACTCGGCGTAAGAGCCGTCGCGATTGAAGTCGA
AGACGCTGAGTCAGCCTTCTCCATCAGCGTAGCTAACGGCGCCGTTCCTTCCTCACCTCCTAGCGTCCTAGACGGAGCCGTTACGA
TCGCGGAAGTTAAACTATACGGAGACGTCGTCCTCCGTTACGTCAGTTATAACGGAGGAGAAACCGATAAATCTTATTTCCTTCCC
GGATTTGAGCTTGTGGATGATACGTCGTCGTTTCCACTCGACTACGGTATAAGGCGTCTTGACCACGCCGTTGGAAACGTCCCCGA
GCTTGGTCCAGCGTTGACTTACCTATCGGGGTTCACTGGCTTTCACCAGTTCGCGGAGTTCACAGCAGACGACGTGGGAACAGCCG
AGAGCGGTTTGAACTCGGCGGTGCTAGCCAACAACGACGAGATGGTTCTTCTACCGGTAAACGAGCCGGTTCACGGGACGAAGAGG
AAGAGTCAGATTCAGACGTATCTGGAACACAACGAAGGCGCGGGGCTGCAGCATCTGGCTCTGATGAGCGAAGACATATTCAGGAC
TCTGAGGGAGATGCGGAAGAGGAGCGGCGTTGGAGGGTTCGACTTCATGCCTTCTCCTCCGCCTACTTACTACAAGAATCTCAAGA
AAAGGGTTGGAGATGTGCTCGGCGACGAACAGATTAGGGAGTGTGAGGAGTTGGGGATTCTTGTGGACAGAGATGATCAAGGGACG
TTGCTTCAGATCTTTACAAAGCCACTTGGTGACAGGCCGACGATATTTATAGAGATAATACAGAGAGTAGGATGCATGAAGAAAGA
TGAGGAAGGGAAGGTTTACCAGAGTGGAGGATGTGGTGGCTTTGGCAAAGGTAACTTTTTTGAGCTCTTCAAGTCTATTGAAGAGT
ATGAGAAGACTCTTGAAGCCAAACAGCTTGTGGGTTGAAGAAGAAGAAGAAGAAGAAGAAACTCAAAAGGATTGTAACTGATATGT
AAAACTGTTTTACAAAAATGTCTTCCCCAATGTATAAACCCCAACTCAGTATTTTAAGATCTTTGTAATGAAAACAGATGTAAACA
ACCCAAAAAAATTAGATAATATAAGTTGTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892349 4-hydroxyphenylpyruvate dioxygenase [Arabidopsis lyrata subsp. lyrata]20883e-232
BAJ34100 unnamed protein product [Thellungiella halophila]20652e-229
NP_172144 4-hydroxyphenylpyruvate dioxygenase [Arabidopsis thaliana]20571e-228
P93836 RecName: Full=4-hydroxyphenylpyruvate dioxygenase; AltName: Full=4-hydroxyphenylpyruvic acid oxidase; Short=4HPPD; Short=HPD; Short=HPPDase20571e-228
AAM96960 4-hydroxyphenylpyruvate dioxygenase HPD [Arabidopsis thaliana]20525e-228

Swiss-Prot top hits (Blast detail)Scoree value
P93836 4-hydroxyphenylpyruvate dioxygenase20738e-232
O23920 4-hydroxyphenylpyruvate dioxygenase16525e-183
Q9ARF9 4-hydroxyphenylpyruvate dioxygenase15908e-176
O48604 4-hydroxyphenylpyruvate dioxygenase13344e-146
O42764 4-hydroxyphenylpyruvate dioxygenase5154e-051

TrEMBL top hits (Blast detail)Scoree value
Q8L7E8 4-hydroxyphenylpyruvate dioxygenase HPD20523e-228
Q09JZ2 4-hydroxyphenylpyruvate dioxygenase20408e-227
O82449 P-hydroxyphenylpyruvate dioxygenase19271e-213
B9S300 4-hydroxyphenylpyruvate dioxygenase, putative17182e-189
D2CZY0 4-hydroxyphenylpyruvate dioxygenase16672e-183

Arabidopsis top hits (Blast detail)Scoree value
AT1G06570.1 PDS1 (PHYTOENE DESATURATION 1); 4-hydroxyphenylpyruvate dioxygenase20745e-233
AT1G06570.2 PDS1 (PHYTOENE DESATURATION 1); 4-hydroxyphenylpyruvate dioxygenase17824e-199
AT1G23540.1 protein kinase family protein1166e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
184  25%
 
2110  63%
 
202  13%

Unigene MembersMember information