Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN50842

FASTA Sequence
Unigene ID: UN50842Length: 970  SNP
CTATAACAGATATTTATAACTTTGTACGAACAACAGTTGATGACTCCCCTTACATTAGCCCCACAGGAAAACAACATAGAATAAAG
ATAAGATACATATCCATGCGGGCATGACAATTGATTACTCTAGTTTAAAAATATAGAAAAAGGTTCAACAGAAATAGAGAGTACAT
GGCTCAAATAGAACCAAACATTAAACCGATACTGAAAATCAAGCCAAAATCATGTAAACATAACAAGATTAGTCGACTTCCTCAAT
CTTGGGGCCAGCACCTCCGGTAGAAGGAGGAGCTTCATCGTCATCCATTCCAGCGGGACCACCTGCCTCACCACCAGCTCCTTGGT
ACATCTTCGCAATGATGGGGTTGCAAACGCTCTCCAACTCCTTCATCTTGTCCTCAAACTCATCTGCTTCAGCAGTCTGGTTACCA
TCAAGCCACTGGATGGCTTCCTCAACCGAATCCTCAATCTTCTTCTTGTCTGCAGCAGGAAGCTTCTCACCAATCTTGTCATCACG
AATTGTGTTCCTCATGTTGTAAGCATAGTTCTCAAGAGCATTCTTGGCCTCCACCTTCTTCTTGTGCTCCTCATCCTCAGACTTGT
ACTTCTCAGCCTCTTGCACCATCTTCTCAATCTCGTCTTTAGACAAGCGACCCTTGTCGTTGGTGATGGTGATCTTGTTCTTTTGA
CCGGTGGTCTTGTCCTCGGCAGAGACGTTGAGGATACCGTTTGCGTCAATATCGAAACAGACTGTGATCTGAGGGACACCACGTGG
AGCAGGAGGAATGCCAGAGAGCTCGAACTTTCCGAGAAGATTGTTGTCCTTGGTCCTAGCCCTCTCACCTTCGTAGACTTGGATCA
ACACACCAGGCTGGTTGTCGGAATAAGTGGAGAAGACCTGCTACTTTTTGGTCGAAGAATAAAGCTTTGGAGGCGGCGGTGAAGGG
AAGTAGGTTTAGAGTTTGTGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195870 heat shock 70kDa protein 1/8 [Arabidopsis thaliana]10854e-116
CAA52684 heat shock protein 70 cognate [Arabidopsis thaliana]10854e-116
CAA54419 heat shock cognate 70-1 [Arabidopsis thaliana]10845e-116
XP_002873055 predicted protein [Arabidopsis lyrata subsp. lyrata]10828e-116
XP_002873056 HSC70-1 [Arabidopsis lyrata subsp. lyrata]10782e-115

Swiss-Prot top hits (Blast detail)Scoree value
P22953 Heat shock cognate 70 kDa protein 110852e-117
P22954 Heat shock cognate 70 kDa protein 210781e-116
O65719 Heat shock cognate 70 kDa protein 310205e-110
P29357 Chloroplast envelope membrane 70 kDa heat shock-related protein9793e-105
P27322 Heat shock cognate 70 kDa protein 29588e-103

TrEMBL top hits (Blast detail)Scoree value
Q0WUQ6 DnaK-type molecular chaperone hsc70.1-like10782e-115
Q56WH2 DnaK-type molecular chaperone hsc70.1-like (Fragment)10745e-115
Q93VU6 Putative dnaK-type molecular chaperone hsc70.1 protein (Fragment)10503e-112
D3IVL0 Putative heat shock cognate (Fragment)10225e-109
O48563 Heat shock cognate protein HSC7010225e-109

Arabidopsis top hits (Blast detail)Scoree value
AT5G02500.1 HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1); ATP binding10861e-118
AT5G02490.1 heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2)10797e-118
AT3G09440.1 heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)10278e-112
AT3G12580.1 HSP70 (heat shock protein 70); ATP binding10232e-111
AT1G16030.1 Hsp70b (heat shock protein 70B); ATP binding8476e-091

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  44%
 
114  44%
 
101  11%

Unigene MembersMember information