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Information for unigene UN50845

FASTA Sequence
Unigene ID: UN50845Length: 970  SNP
GGGAGTGAAGGAGAAGACGACAGACAAGTTTGCAGTTTCAATTCAAAGGTTTCCGCGTACAGAATTAAACAATGGCGGATAAGGCC
GAGAAGATGAAGCTCCGGCAAGATTACCGGAACTTATGGCACTCCGATCTCATGGGAACCGTCACCGCCGACACTCCCTATTGTTG
CTTGTCGTGTGTGTGTGGACCGTGTGTTTCTTACTTGCTTCGGAGAAGAGCACTTTACAATGACATGTCCAGGTATACTTGCTGTG
CTGGATACATGCCCTGTAGTGGGAGGTGTGGAGAAAGCAAATGCCCTGAACTCTGCCTTGCTACTGAGGTTTTCCTCTGTTTCGGA
AACTCTGTGGCCTCTACTCGCTTTCTTCTCCAGGATGAATTCAACATCCAGACTACAAAATGCGACAATTGCATTATTGGATTTAT
GTTCTGCCTAAGCCAAGTCGCTTGCATTTTCTCTATTGTTGCTTGCCTCGTTGGTAGCGAGGAACTCTCTGAAGCTTCTCAGATAC
TCTCTTGCTGTGCCGATATGGTCTACTGCACGGTCTGCGCGTGTATGCAGACTCAACACAAGCTTGAAATGGACAAAAGAGATGGA
GTGTTTGGTCCTCAGCCAATGGGCGTTCCACCGGCACAGCAGATGTCCCGTTTTGACCAACCTGCCCCTCCAGTCGGCTACCCTCC
TGCGTCTTACCCACCGGCTCAAGGCTACCCTCCTGCACCTTACCCACCGGCTCAAGGCTACCCTCCTGCATCTTATCCGCCTCCTG
GTTATCCCCAACATTGAGGAACTTTAAACCAATATCTTCATATTGTGTGTCAAAGTGTTGTTGTTATTACTGTTCAGCTATTTTTT
TCAGTTATGTGGCTGCTTTGCAAGTATTAGTACTCTGGTTTATGCACTAAAACATTTGGTATCATCTGGTGTGTTGACTTTGTTGG
TATTTTTCTCCCATTTATCTGATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887935 proline-rich family protein [Arabidopsis lyrata subsp. lyrata]11661e-125
NP_176568 PLAC8-like protein [Arabidopsis thaliana]11535e-124
XP_002870638 hypothetical protein ARALYDRAFT_330382 [Arabidopsis lyrata subsp. lyrata]10674e-114
NP_198955 PLAC8-like protein [Arabidopsis thaliana]10666e-114
ABK28735 unknown [Arabidopsis thaliana]10666e-114

Swiss-Prot top hits (Blast detail)Scoree value
Q54HX8 Protein LITAF homolog1764e-012
P09241 Rhodopsin1594e-010
O16005 Rhodopsin1504e-009
Q8LCL8 UPF0467 protein B1495e-009
P24639 Annexin A71381e-007

TrEMBL top hits (Blast detail)Scoree value
Q9CAJ7 Putative uncharacterized protein At1g6383011533e-124
A0MFL3 Putative uncharacterized protein (Fragment)10664e-114
Q45GG6 Putative uncharacterized protein10664e-114
B8ALY9 Putative uncharacterized protein10639e-114
Q10SG5 Os03g0123600 protein10639e-114

Arabidopsis top hits (Blast detail)Scoree value
AT1G63830.2 proline-rich family protein11532e-126
AT1G63830.1 proline-rich family protein11532e-126
AT5G41390.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT1G63830.2); Has 12019 Blast hits to 5816 proteins in 448 species: Archae - 6; Bacteria - 1151; Metazoa - 4980; Fungi - 1500; Plants - 2605; Viruses - 338; Other Eukaryotes - 1439 (source: NCBI BLink).10662e-116
AT4G23470.1 hydroxyproline-rich glycoprotein family protein10124e-110
AT4G23470.3 hydroxyproline-rich glycoprotein family protein9873e-107

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  38%
 
191  13%
 
201  13%
 
122  25%
 
71  13%

Unigene MembersMember information