 |
Information for unigene UN50910
| FASTA Sequence |
| Unigene ID: UN50910 | Length: 1101 |
| SNP | GCTTCAAATATTATCTACCTTCCCACACTTGTTTTACATCCACATGAAAAGAAATTTAAATATGTTTGTTTTCTCTTGATCAAAAC
AAAACTATATAAAATGATTTGAACATTAATCATGATAACACATGTATATGTTTTCAATGTACTTTCTGACCATGAAAACATAGTTC
TGTCTGCCTTAAGCAGCAACTTCTTGGTCCTTGGACGAAAGCTGGTTCTGAATATGCTGAGGAACAACATCGAACTTAGCCAACTG
CATTGTGTAAGACGCACGACCTTTTGTCATCCCTCTCAATGTACTCACATACTGAAACATCTCTGCTAATGGAACCAGAGAATCCA
CCACCTTGAGACCACCGGGTTTGTCTCCAAAGCTGTTGATCTGACCTCTTCTGGAGTTAAGATCACCAATGACATCACCAAGATGT
TCTTCAGGTGTAACAACTTCAACTCTCATGATAGGTTCAAGCATTCTCGGACCAGCTTTCCTCATCCCTTCACGGAAAGCTCCTCT
CGCAGCTAGCTGGAAAGCTAGCACGCTCGAGTCCACATCATGGTATGATCCATCAACTAGACAAGCACGGACGTCAACAACCGGAA
AACCCGCAAGCACACCTGAGCCCATACACTCCTCAAGTCCTTTCATCACACCGGGGATATACTCTCTCGGCACCGCTCCTCCTTTG
ATCTCACTCTTGAACTCGTATCCTGATCCTGCTTCCAACGGCTCAAACCTGACTGTAATATCAGCAAACTGTCCTTGTCCACCTGA
TTGCTTCTTGTGTGTGTATTTCACTTCAGCTACTTTTGAGATACTCTCACGGTAGTTCACTTGCGGTGCTCCAACGTTCGCCTCAA
CCTTGAACTCTCTTTTAAGCCTGTCGACGATGATCTCAAGATGAAGCTCTCCCATCCCTTCGATGACGGTTTGGTTCATCTCTTCG
TCACGTGAGAAATGGAAAGACGGTCTTCTTGAGCGAGCTTGATCAGTCCTGTAGCCATTTTATCAATGTCTGCTTTCGTTTTTGGC
ACAATCGCCACCTTGATGACGGGATCAGGGAAGTCCATACGCTCAAGGACAACAGGGCTTTCTGGATCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564801 elongation factor EF-G [Arabidopsis thaliana] | 1329 | 2e-144 |
| AAK64040 unknown protein [Arabidopsis thaliana] | 1329 | 2e-144 |
| BAD93878 elongation factor G [Arabidopsis thaliana] | 1323 | 1e-143 |
| XP_002886457 ATSCO1/ATSCO1/CPEF-G [Arabidopsis lyrata subsp. lyrata] | 1321 | 2e-143 |
| CAA50573 translation elongation factor EF-G [Glycine max] | 1270 | 2e-137 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P34811 Elongation factor G, chloroplastic | 1270 | 7e-139 |
| Q2W2I8 Elongation factor G | 870 | 2e-092 |
| Q2RQV7 Elongation factor G | 860 | 2e-091 |
| A8EXK1 Elongation factor G | 843 | 2e-089 |
| A7HWQ8 Elongation factor G | 842 | 3e-089 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94BR7 Putative uncharacterized protein At1g62750 | 1329 | 2e-144 |
| Q9SI75 Elongation factor G | 1329 | 2e-144 |
| Q56XA2 Elongation factor G | 1323 | 8e-144 |
| B9GVR2 Predicted protein | 1267 | 2e-137 |
| B9RBP7 Translation elongation factor G, putative | 1265 | 4e-137 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G62750.1 SCO1 (SNOWY COTYLEDON 1); ATP binding / translation elongation factor/ translation factor, nucleic acid binding | 1330 | 7e-147 |
| AT1G45332.1 mitochondrial elongation factor, putative | 566 | 3e-058 |
| AT2G45030.1 mitochondrial elongation factor, putative | 566 | 3e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
