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Information for unigene UN50914

FASTA Sequence
Unigene ID: UN50914Length: 944 SSR 
ACCTTTCAATCACTTTAACCAGTGCTCCACTCAATCTTCTTCTTTCACCAAAACAACAGCTGGTAGGGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCCAAACTCTTTCCCTCAAGCTCTCAAGAGAATCAAACTCCAAAGATGAGCAGTTTC
TACGAGCATTACGAGTTCCCATACGATTCCAACCAGGTTCATCATCTCTACGATCATAACTTTTATGATAACAATCAACATCAGCA
GTTTGGTTTTGATCCAATGAGTTATAATAATAGTTATAATAACTGGAATGGATCTGAGTACGAGTATGAGTATGAGACAGCCTCTG
CATCTGTTGCTTACTCTGTCTCCACCTTGTCTGAGCCGAAGCACTTGTTCTATGATCCGAGTTACTACACAACAACAACAACCTAC
GAGTCTCCTCCTCAGTTCAGTATCTACTGCAATGTTCAAGGCTTCAACGAGCCGGAGTTCGAAGAGTACGATCCGACGCCATACGG
TGGCGGCTATGATATCGTTGCAACATACGGGAAGCCTCTTCCTCCGTCGGTGAACACTTGTTACCCTTCTTCAACCGCTGATCAGG
GTAAACCTCCTTCTCCTCCGGAGATCATCGCTCCTGTTCCTCTTGGAATCTATGGTGATGGTGAAGAAAAGAAAGCTGTCAAGAAA
CGTGTGACTTTCTCTGAGCCATTAGAGGAAGCTAAACCATTACAACCCATTCAAGAAGAAGAAAATGATCATCAAGAAGAGGAAGA
GGAAGATGAAGATGAAGAAGAGGAGGAAACAGAAAAAGATCACAGTTCAAGCAATGAAACTGTAGATAAAGTTGAAGTGAAAGCTT
TGTATGTTCCATCTGGTTACGGTTTAGAAGCGACTGATCTCTGCGAGGTTATATTCGGAGGCTACTTTCCTTGTGTCTTACGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889868 hypothetical protein ARALYDRAFT_471281 [Arabidopsis lyrata subsp. lyrata]6769e-069
NP_172611 uncharacterized protein [Arabidopsis thaliana]6543e-066
XP_002518589 conserved hypothetical protein [Ricinus communis]3327e-029
XP_002316699 predicted protein [Populus trichocarpa]3041e-025
CAN76854 hypothetical protein VITISV_006002 [Vitis vinifera]2475e-019

Swiss-Prot top hits (Blast detail)Scoree value
Q9FKA5 Uncharacterized protein At5g395701532e-009
Q7M732 Retrotransposon-like protein 11219e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LPZ0 At1g114406542e-066
B9RXX0 Putative uncharacterized protein3325e-029
B9HYT2 Predicted protein3049e-026
A5BG40 Putative uncharacterized protein2474e-019
B9H1W5 Predicted protein2375e-018

Arabidopsis top hits (Blast detail)Scoree value
AT1G11440.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 22740 Blast hits to 8622 proteins in 417 species: Archae - 22; Bacteria - 573; Metazoa - 11353; Fungi - 2147; Plants - 905; Viruses - 631; Other Eukaryotes - 7109 (source: NCBI BLink).6541e-068
AT3G29075.1 glycine-rich protein1414e-009
AT5G03710.1 unknown protein1129e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
215  71%
 
191  14%
 
181  14%

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