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Information for unigene UN50930
| FASTA Sequence |
| Unigene ID: UN50930 | Length: 752 |
SSR | | GATAGCGGAAGAAAAATGGAATCGAGTTCTCCTCCTCCTCACTTCAAGGTGGTTTTGGGATCTTCATCGATTGCTCGACGAAGTAT
ATTAACAGACATGGGATACCAATTCACTCTAATGAGTGCTGATATTGACGAGAAAAGCATCCGTAAGCAGAATCCTGAAGACTTGG
TTTTAGCTTTAGCTGAGGCAAAGGCTGAAGCAATCATGCAGCGGATGGCTGATGACGACGACGACGACATAAAGGAGACCTTACTT
GTTACTTGTGACCAAGTTGTCGTCTATGAAAATGTGGTTAGAGAGAAACCATCGAGTGTGGAAGAAGCAAGGGAATACATAAGAGG
CTATTCCAAGGGACACACTGCAACTGTCAGTTCTGTTGTTGTAACAAATCCCAAAACAGGATTCAGAAAAGGAGGCGTCGATAGAG
TGGAGATATATTTCTCCGAAATATCGGAGGAGACTATCGCGAAACTGATTGAGGAAGGCATGGTGCTTAAGGTAGCTGGTGCACTC
CTAATCGAACATCCTCTAATATCGCCATGCGTTAAAGAAATGGTTGGGACAATAGATAGTGTCATGGGTCTGCCTAAAAAATTGAC
TGAGGAACTTCTAAAGGAAGCAATGGCAAGCACACAGGAGAAAATGTCTGGTGTCTAAAAATGTTGGTTTGTTATTTAATGATCGA
TCTGCTTTCTGCTACTTGCGAGAATTTTATGGATAAGTTGTTTTGACTTGTTTCTAACGAGTAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865485 hypothetical protein ARALYDRAFT_331123 [Arabidopsis lyrata subsp. lyrata] | 836 | 2e-087 |
| NP_199091 Maf-like protein [Arabidopsis thaliana] | 835 | 2e-087 |
| ACU21322 unknown [Glycine max] | 665 | 1e-067 |
| XP_002281383 PREDICTED: hypothetical protein [Vitis vinifera] | 653 | 3e-066 |
| NP_001150369 LOC100283999 [Zea mays] | 605 | 1e-060 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54TC5 Maf-like protein DDB_G0281937 | 393 | 2e-037 |
| Q2SBH1 Maf-like protein HCH_05331 | 170 | 1e-011 |
| Q5QZ35 Maf-like protein IL1346 | 163 | 9e-011 |
| Q9KUU7 Maf-like protein VC_0418 | 158 | 3e-010 |
| Q47VG7 Maf-like protein CPS_4557 | 156 | 6e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6THM0 Putative uncharacterized protein | 665 | 8e-068 |
| B6TNZ3 Maf-like protein CV_0124 | 605 | 7e-061 |
| Q10PL9 Maf family protein, putative, expressed | 602 | 2e-060 |
| B8AJL7 Putative uncharacterized protein | 601 | 2e-060 |
| B9F6L8 Putative uncharacterized protein | 601 | 2e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G42770.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf family protein (TAIR:AT5G66550.1); Has 4061 Blast hits to 4057 proteins in 1128 species: Archae - 23; Bacteria - 2744; Metazoa - 45; Fungi - 50; Plants - 61; Viruses - 0; Other Eukaryotes - 1138 (source: NCBI BLink). | 835 | 1e-089 |
| AT5G66550.1 Maf family protein | 549 | 1e-056 |
| AT2G25500.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf family protein (TAIR:AT5G66550.1); Has 693 Blast hits to 693 proteins in 244 species: Archae - 0; Bacteria - 474; Metazoa - 0; Fungi - 5; Plants - 50; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink). | 245 | 2e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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