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Information for unigene UN50943
| FASTA Sequence |
| Unigene ID: UN50943 | Length: 838 |
SSR | | TTCGGCACAGTGTCACGAATCTTTCTTTCTCTCTCTTCTTCAATAGACACATAGCAATCATGACTACCGAAGAGAAAGAGATCCTC
GCCGCCAAATTGGAAGAACAAAGGATCGATCTTGATAAGCCTGAAGTTGAGGACGATGAGGATGACTCCGACGATGATAAAGATGA
TGATGATGATGCGGAGGGGCAAGATGGAGAGGGAGGAGGAAAGTCAAAACAAAGCAGAAGTGAGAAGAAGAGCCGCAAAGCCATGC
TCAAGCTCGGTATGAAACCCATCACTGGTGTCAGCCGTGTCACCGTCAAAAAGAGCAAGAACATCATGTTCGTCATATCGAAACCC
GATGTGTTCAAGAGCCCGGCTTCAGACACATACGTAATCTTCGGAGAGGCCAAGATCGAAGACCTGAGCTCTCAGATGCAGTCGCA
AGCTGCGGAGCAGTTCAAGGCTCCGGATCTCAGCAAGGTGATCAAGGGCGAATCTTCGTCGTCCACCGCTGCTGCAGTGGTGCAGG
ATGATGATGATGAGGAAGTCGACGAGGAAGGTGTTGAGCCAAAGGACATTGAGTTGGTGATGACGCAAGCAGGTGTGCCTAGGCCA
AGGGCCGTGAAGGCTCTCAAGGCTGCTGATGGAGATATCGTCTCTGCCATCATGGAGCTTACCACCTAAACCAAAAAATGTTTTCC
AACTTTAGATGTGGTTTTAACATGAGTTATATGTGTCCCAGAGATTTTCAAAAGGTTTCGCAAGGTTTTTGTTTCTATCTTGAAGT
GATTTTCAATGTTGTATCAGTATTATAGTTTGGTTTGTTATTCCATTATCAAGCGTCGGTGGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196889 Nascent polypeptide-associated complex subunit alpha-like protein 3 [Arabidopsis thaliana] | 863 | 2e-090 |
| XP_002871590 hypothetical protein ARALYDRAFT_909339 [Arabidopsis lyrata subsp. lyrata] | 853 | 2e-089 |
| NP_187845 Nascent polypeptide-associated complex subunit alpha-like protein 1 [Arabidopsis thaliana] | 841 | 5e-088 |
| NP_001136911 hypothetical protein LOC100217069 [Zea mays] | 687 | 4e-070 |
| ABK23835 unknown [Picea sitchensis] | 683 | 1e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6ICZ8 Nascent polypeptide-associated complex subunit alpha-like protein 3 | 863 | 7e-092 |
| Q9LHG9 Nascent polypeptide-associated complex subunit alpha-like protein 1 | 841 | 2e-089 |
| Q9M612 Nascent polypeptide-associated complex subunit alpha-like protein | 679 | 2e-070 |
| Q94JX9 Nascent polypeptide-associated complex subunit alpha-like protein 2 | 622 | 6e-064 |
| Q9SZY1 Nascent polypeptide-associated complex subunit alpha-like protein 4 | 621 | 8e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PA21 Putative uncharacterized protein | 705 | 2e-072 |
| A9NLN5 Putative uncharacterized protein | 704 | 3e-072 |
| A9P8T1 Putative uncharacterized protein | 697 | 2e-071 |
| A2PYH3 Alpha chain of nascent polypeptide associated complex | 687 | 3e-070 |
| B4FL79 Putative uncharacterized protein | 687 | 3e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13850.1 NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) | 864 | 5e-093 |
| AT3G12390.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 861 | 1e-092 |
| AT3G49470.1 NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) | 623 | 4e-065 |
| AT4G10480.1 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 622 | 6e-065 |
| AT4G10480.2 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative | 616 | 3e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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