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Information for unigene UN50960

FASTA Sequence
Unigene ID: UN50960Length: 1473  SNP
GCTGTTCTCACTTTTCTTGCTACGGAACGCTGTTCTTTTTTCCCATCCTTCTGATGAAATACTTTTCTGGCCATGTAGGTTATGAG
TAGAATCAGAACGCTTGTGACTAAAACCGAAACTCTAAGAACCGGAGTCACTGCTAGTGATGCAGCTTTGACATTGAAAATCGCTC
CAGCAATGGCCAATGAACATCTACTATCTGCAGAGACCAAAGGTAATCAGAACCCCAGCTCGTAGAAACCGGATACCATAAGAGCT
ATGTGATTCTCACGCTGCCATTTGTTTTGTTTTGATCAGGTCTGCTGTGTAGAGACATGAGCCCAGACGGGCTTCGATTTTATTTC
AACCTGTTTCACGAGTTCGATTTGACCAATCTCCATTTGTAAGTCAAATAGCACACCATAGATGTTTTTCCCGTTGTGTTGCTCAG
TGAGAAACTAATAAACCTTTGGGCTTGGCAGCGTGAAGGACTTTGGGACATACGGTGAATGGGTCAAAGCGACTACTTTGTTGTCC
GTATGACAGTATTTGATGTGTACACATGCAAACAAAAGGATCAAAACATTGTTTCACTTCAAAATAGTGTGCTTTTTTTTGTAAGT
TTTGAATTTGCTATTCTGTATTTATATCCGCCAGACAGAGCTTCAAGCCTGACAATCTAAAAGATAACTTTGAGAATAACAAATCC
CATTTGCACATCCTTCTAAAAACATCAAGTTGACTGTCGAATGGTAAATAAGTGAAGAGATTGGGACACAGTTAATCGGCTTCAAG
GGCTGCAATCTCGTACCTAATGTCTTCCAAATACTCATTGATGCAAGTCACAGCGTCTTGCACTCCTCTAATAGCTTCCTTTAAAG
CGTTGTCGAACTCTGCATCCGCTTCTGCTTCCTCTGTTCCTGCAGCTTCAGTGATCTCATGAAGATGAACACACTCGTGCTGCATC
GGTTTCTTGAACTTGCAGTTCTCATGTGTGAGCATCCGTTCTGACGGCCTCCCTGCCTTCTTCAGTACCTGTATTGTGACCGTCAG
ATGCAGTTTCTGCTTCTCCTGAGTTTGAATGTCGCTGAGCAGTTGAGCAAGATCCGATCTTCCAACTTCTGGATTCAGAAACAGAG
TTTCCATTTCGCGCACTTGTTTGGAGCATTCGTTGAACTCAGCAGTAATCTCGCTGCACAGCTTCTGATAAAGTGCTTCACCACTA
GTCTCCACATACTCTGAGAATCCTCTTTTGAGTTTGGCGTAGGCCTGGGCTCGACGCTCCTGAATCTCAAGCAATCTCCGAAGCAA
AACCAGGGTTCGAGAGGCTACCCCCGTGGAGCTACTAGACCCAACACATTCGATTTCCATTTTCCCGTCGATGGGATCACTGATTG
AAACCTTCTTCTGAAAATCTTCGGCACTCATCTCTCCTAGACTCTCTTTCAACTTCTCAAACACGACAGAGAGAAAAGAGAAACCA
ATCTCAGTCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABV89667 hypothetical protein at5g04910 [Brassica rapa]9485e-100
NP_196111 uncharacterized protein [Arabidopsis thaliana]9371e-098
ABK28681 unknown [Arabidopsis thaliana]9333e-098
XP_002871123 hypothetical protein ARALYDRAFT_487277 [Arabidopsis lyrata subsp. lyrata]9324e-098
BAB11513 unnamed protein product [Arabidopsis thaliana]8983e-094

Swiss-Prot top hits (Blast detail)Scoree value
Q9FF81 Vacuolar protein sorting-associated protein 362019e-015

TrEMBL top hits (Blast detail)Scoree value
A8IXX2 Putative uncharacterized protein9483e-100
Q1PE01 Putative uncharacterized protein9377e-099
A0MFD8 Putative uncharacterized protein (Fragment)9332e-098
Q9FF82 Dbj|BAA90353.18982e-094
B9HK92 Predicted protein7782e-080

Arabidopsis top hits (Blast detail)Scoree value
AT5G04910.1 unknown protein9383e-101
AT5G04920.1 vacuolar protein sorting 36 family protein / VPS36 family protein2018e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  33%
 
104  44%
 
122  22%

Unigene MembersMember information