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Information for unigene UN50987

FASTA Sequence
Unigene ID: UN50987Length: 1175 SSR 
AACCAAAGCTGAAAACTGGTCGATTCTTCCGGTTACCAACGAACGATTCCAATTAAGACTAACACGGCCATACCAAAAAATGTGAT
TGCAAAAGAAAAAAAAAGAAAAAATTTCTTAACTACATAATTTCCAAAAGAAAAGTAAAGCAAATGAAAAACTGAGAAAAAGACAA
CTCTGTTTTTTACTAATTTGTATTGCTTCAATAGATAATTAAGAAAACACCTATGATTTAAGGTAATATAAGCTCTTCTTATGGAT
TAGAAGTGCAATCTCCAAGCCATATTCTTTTACATGAAATCATCGTCGTCCATGGCGCCATAAGGACCCGAAACAAGATCATCGTC
AGGCTTATCCACATGCAGTTGTTTCTTCTTACCTGTCTTCTTTTTGCCGGCAGCAGCTTCTTTCTCTGCCTTGAGTTTTTCGTTAC
CTATTGCCGAAACAGAGGAAGCAACGTCTTTAACATCAGCTGCTTTCATATTCGCCACAGAAAGTCTCATCACTGCTTTGAGCAGC
CCAATATAGTGAAAGCTTTTCTCATAAGGTACAAGTTTACGAGATATCATCTCAGCATACTCCAAGAAATCGCTTTCAGACTTGGG
AATGAAAACATCAACGGCTTTTTCATCAGTCTTTGCTCCAAACAGTTCAGCAGTTGCCTCGTAATCAGCTTCCTCCACTAGCCTCT
GCATGCGAAGTTTGTCAGCAATAGGATCAAAAGGTTCATCCTTTGATGGTTCTCTTGGAGGAGCTTCAACAGATTTACCCTTCTTT
TCAACAGCTTTCTTTGGAGCAGGCTTTACTACAGCTGCAGGAGTAGGTTCATCATCATCCTCCTCCTCCTCCTCCCAAGAGTCTTT
GATGTCATTCTCATCAACATCCTCCTCAACATCCTCATCATCCCAATTGCTTTTAAGTTCGACTTTTGCAGGAGTTGGTTGAAATT
CTTCAGTCTCCCAATCATCCATCTTTGTCTTCTAATTATCTATAAGAACAAAAGTACAATTTGCTGTTCTGAATCCAAGTGAAAAA
CCTGAATCGTAGAGAGAAATAGAAAAACAGTTCGATTCGTCGGTGAAAACTCCGATGTTCAAAGGAAGAAGGAGAAGACGAAACGA
CTGCCAATAACTATTTGGTGTCTTTAGGGCTTTCTCTCGCTCACTTTTTTTCTACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870534 hypothetical protein ARALYDRAFT_493723 [Arabidopsis lyrata subsp. lyrata]8874e-093
NP_850918 Translation initiation factor eIF3 subunit [Arabidopsis thaliana]8841e-092
NP_564865 Translation initiation factor eIF3 subunit [Arabidopsis thaliana]8222e-085
XP_002888479 hypothetical protein ARALYDRAFT_475711 [Arabidopsis lyrata subsp. lyrata]7853e-081
XP_002519577 Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]7154e-073

Swiss-Prot top hits (Blast detail)Scoree value
B4KTH6 Eukaryotic translation initiation factor 3 subunit J2922e-025
Q0VCU8 Eukaryotic translation initiation factor 3 subunit J2885e-025
Q5ZKA4 Eukaryotic translation initiation factor 3 subunit J2842e-024
Q5R8D1 Eukaryotic translation initiation factor 3 subunit J2805e-024
O75822 Eukaryotic translation initiation factor 3 subunit J2796e-024

TrEMBL top hits (Blast detail)Scoree value
Q8GRX2 Putative uncharacterized protein8847e-093
Q9C8D8 Putative uncharacterized protein At1g660708221e-085
B9S0Q8 Eukaryotic translation initiation factor 3 subunit, putative7153e-073
A9P9B6 Putative uncharacterized protein6777e-069
B9H3E9 Predicted protein6777e-069

Arabidopsis top hits (Blast detail)Scoree value
AT5G37475.1 translation initiation factor-related8907e-096
AT1G66070.1 translation initiation factor-related8234e-088

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  67%
 
102  33%

Unigene MembersMember information