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Information for unigene UN50991
| FASTA Sequence |
| Unigene ID: UN50991 | Length: 747 |
SSR | | GGATCTCATTTTGCCTCAAATCCATCAGTGAAGGGCAGCAGGAGGAGGAGGAGGAGCAACCAGTAGCCATGGCGGAACAGACTGAG
AAGGCATTTCTAAAGCAACCAAAGGTGTTCCTAAGCTCGAAGAAATCAGGGAAAGGAAAGAGGCCTGGAAAGGGTGGAAACCGTTT
CTGGAAGAACATTGGTTTGGGTTTCAAGACTTCCCGCGAGGCCATTGACGGACATTACATTGACAAGAAATGTCCACTCACTGGAA
CTGTCTCTGTGAGAGGACGTATCTTAGCTGGTACTTGCCACAGTGCCAAGATGCAGAGAACCATCATTGTTCGCAGAAACTATCTC
CACTTCGTCAAGAAGTATCAAAGATATGAGAAGAGACATTCCAACATCCCTGCCCATGTCTCACCCTGCTTCCGTGTCAAAGAAGG
TGATCATGTCATCATCGGCCAATGCAGGCCGTTGTCAAAGACCGTGAGGTTCAATGTGTTGAAGGTGATCCCAGCCGGCGCATCTG
CCTTTGCAAAGAAGGCGTTCACTGGAATGTAATAGTTTTGAAGTTACGGAGAGTCTTCTTCGTTTGGTTTTTATATTTCTTTCGGA
ATTTTCTGTTTGTTGATCTCTTTTGTGTAAGACTTGGTCTATCCACAGACTGAATAGAAACCTACGTACTACTTTCGTCATCTGAA
ATTACTACATTCGACTGTGCTGTGACTTCTGTCTTTGGTATCTCCAGAAGAAATCAAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197763 40S ribosomal protein S11-3 [Arabidopsis thaliana] | 798 | 4e-083 |
| XP_002874145 ribosomal protein S11-beta [Arabidopsis lyrata subsp. lyrata] | 796 | 7e-083 |
| AAA32866 ribosomal protein S11 (probable start codon at bp 67) [Arabidopsis thaliana] | 794 | 1e-082 |
| XP_002880547 ribosomal protein S11-beta [Arabidopsis lyrata subsp. lyrata] | 793 | 2e-082 |
| NP_190462 40S ribosomal protein S11-1 [Arabidopsis thaliana] | 790 | 4e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42733 40S ribosomal protein S11-3 | 798 | 2e-084 |
| P16181 40S ribosomal protein S11-1 | 790 | 2e-083 |
| Q9M5M1 40S ribosomal protein S11 | 772 | 2e-081 |
| O65569 40S ribosomal protein S11-2 | 770 | 4e-081 |
| P17093 40S ribosomal protein S11 | 768 | 6e-081 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SKG4 40S ribosomal protein S11, putative | 778 | 6e-081 |
| B9T2N6 40S ribosomal protein S11, putative | 775 | 1e-080 |
| Q1H8R1 40S ribosomal protein S11 | 774 | 2e-080 |
| C6SVJ4 Putative uncharacterized protein | 768 | 9e-080 |
| B6T2A5 40S ribosomal protein S11 | 767 | 1e-079 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G23740.1 RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA); structural constituent of ribosome | 799 | 1e-085 |
| AT3G48930.1 EMB1080 (embryo defective 1080); structural constituent of ribosome | 791 | 1e-084 |
| AT4G30800.1 40S ribosomal protein S11 (RPS11B) | 771 | 3e-082 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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