Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN51041

FASTA Sequence
Unigene ID: UN51041Length: 882 SSR 
GGGTCGATCAGAGAAAAAAAAAATCTACACTTTGCGTCACTTTTCTAGGGTTCTTCTTCTCCAAGCTTTATCTACTAAACATGAGT
CGTCATCCTGAAGTGAAGTGGGCTGAGACCACTGACAAGATTTTGCTCACTGTAGTATTAGCTGATTCCAAGGAGACTAAAGTTAA
TCTAGACCCTGAAGGAGTCTTTGATTTCTCTGCAAAAGCTGGTCCCGAGAACCACGTCTATGAACTTAAACTCGAGCTTCACGGTA
AAGTCAATGTAGAGGAAAGCAAGATTAACATTGGAGTCAGAAGCATCTTCTGCATAATAGAGAAAGCAGAGCCTAAAAGGTGGAAT
AAGCTAGTCCGTGGAGGGAAAGCGCCTCACTATGTCAAGATTGATTGGGACAAGTGGGTTGATGAGGACGACGAAGGCAACAGCGC
TGGTGCTGGAGATATGGATATGGGAGGAATGGGTGGAATGGATTTCTCGAACTTTGGTGGAATGGGTGGTATGGAAGGACTTGGCG
GTATGGGTGGCATGGGTGGACTTGGTGGTATGGCCGGACTTGAAGGACTTGGCGGCATGGGAGGCATGGGTGGTATGGGTGGCATG
GGTGGCATGGGTGGAATGGAAGAGTTTGAAGACAGTGACGATGAAGAATTTGCAAAACCAGGAGACAAGAAAGATGAAGCCGTCAA
GGAAGAAGCGAAACCAGTAGATGTCAAGGAAGACAAATGAAGAAGTTGCTGTTCGTTCCAGATATGAACTCATCACTGTGTTTTGC
TTTCAAGTTTATTATTAGCTAAGGGTTATTATTATTATTAGCTTTTTGAGTTTATTAAACCCTCTGTTTTACTTCCTCTTTTCTAA
AATGTTTTGCTTTTATGGATTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892131 predicted protein [Arabidopsis lyrata subsp. lyrata]8059e-084
CAC16575 p23 co-chaperone [Arabidopsis thaliana]7871e-081
NP_192154 HSP20-like chaperone [Arabidopsis thaliana]7833e-081
NP_001154201 HSP20-like chaperone [Arabidopsis thaliana]7781e-080
XP_002872836 predicted protein [Arabidopsis lyrata subsp. lyrata]7271e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q6YYB0 Uncharacterized protein Os08g03595006925e-072
P0C8Z0 Uncharacterized protein OsI_0279406738e-070
Q5RBM8 RNA-binding protein 122283e-018
Q9NTZ6 RNA-binding protein 122266e-018
Q8SQ27 RNA-binding protein 122257e-018

TrEMBL top hits (Blast detail)Scoree value
Q9FT78 P23 co-chaperone7878e-082
Q8L7U4 AT4g02450/T14P8_57832e-081
O81288 Putative uncharacterized protein AT4g024506892e-070
B7FF72 Putative uncharacterized protein (Fragment)6542e-066
C5YKA7 Putative uncharacterized protein Sb07g0151406327e-064

Arabidopsis top hits (Blast detail)Scoree value
AT4G02450.2 glycine-rich protein9004e-097
AT4G02450.1 glycine-rich protein8889e-096
AT1G49750.1 leucine-rich repeat family protein1673e-012
AT2G32690.1 GRP23 (GLYCINE-RICH PROTEIN 23)1631e-011
AT2G32690.2 GRP23 (GLYCINE-RICH PROTEIN 23)1631e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  80%
 
101  20%

Unigene MembersMember information