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Information for unigene UN51056

FASTA Sequence
Unigene ID: UN51056Length: 972 SSR 
GGTACATAACAATTACTAGAAATTCTGAATTTTTTTGGGTAGGGCTGATCCTTAAAAATACTAAAATCATCCATACACAACAATAT
AACATCAAAGGAAAACGACTAGTAGGAGAGGAGGGGTTACAGAGCTGCCACTAGTTAACACCATAAGAGTCACAGTAACATTCACC
ATCCGCTTTTTGTCACTAGTGAAAGTAAGCAGGAGGAGGAGCCTGGTACTGATAGCAGTTCCCGTAGAAGTTCCCATGAGCAGCAG
CAGCGGGACTGAAAGTGTAAGTCTGAGGAGGAGGAGGAGCTTGTGCTGCCATGATTGGACCGATAAAGAACGGTCTGTTGTCATAC
ACATACTGCGGATACCTCTCAGGGATCACTCTACCATATCCTGTCTTGCTGTTATTGTTGTTGTTGTTGTTGTCAGTGGCCCGGGG
TTGAGGACCACGAGGTCGCTTTGTCTGAGGCTTTGTGGGTTCTGTTGCTCTCTTTTTCTCAGCTTTGGCCTTCTCCAGCTGGAGAA
TTCGTTTGTGAAGTGGCTCCACTGGGTACTGCTCTTCCAGGTTATGCTCTTCCACACACTTTATCACAGCCTTAAGACTCGTCAGC
TCCCTCTCACTGAACTCATCCTGAACAGCAGGAGATGCATTGCCAGGTCTGCCTTGGGAGGTAGATCTACTTGCCTCAGTCAAGTA
ACATTTAAGCAACTCAACAGGTGGGAACTGTTCGGTGAGTCCAAACGCAAATGCCAAGTTCACAGCATCAATCTGTTTACCACTGT
TCAATAGAACTTCAATCACACCAGGCATTTTTTGAGACAATCCAAGAGAACGGCAAAGCTCAGCAGCCTGACGGCGACGTGATACC
ATAGGGATCAGCTTCAAGATGGTAGATCCATCTTGAGCGATCGAGAAATTTTCGTGAGAAGAGGAAAGTGAAATTCGGAAAGGAAA
GTCGAAGGGAGGCAAAAGGAAAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850923 FRIGIDA-like protein [Arabidopsis thaliana]10164e-108
AAM96992 putative protein [Arabidopsis thaliana]10121e-107
CAN80762 hypothetical protein VITISV_014605 [Vitis vinifera]6822e-069
XP_002320559 predicted protein [Populus trichocarpa]6803e-069
ABK94872 unknown [Populus trichocarpa]6732e-068

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q67ZB3 Putative uncharacterized protein At5g4839010162e-108
Q8L7D6 Putative uncharacterized protein At5g4839010127e-108
A5B440 Putative uncharacterized protein6821e-069
B9IB06 Predicted protein6802e-069
A9PER9 Putative uncharacterized protein6731e-068

Arabidopsis top hits (Blast detail)Scoree value
AT5G48385.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Frigida-like (InterPro:IPR012474); BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G22440.1); Has 987 Blast hits to 921 proteins in 78 species: Archae - 0; Bacteria - 16; Metazoa - 58; Fungi - 7; Plants - 873; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).10171e-110
AT3G22440.1 hydroxyproline-rich glycoprotein family protein2956e-027
AT4G14900.1 hydroxyproline-rich glycoprotein family protein2713e-024
AT1G31814.1 FRL2 (FRIGIDA LIKE 2)2392e-020
AT5G27220.1 protein transport protein-related1389e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  80%
 
111  20%

Unigene MembersMember information